Protein–RNA interactions for Protein: O35054

Cldn4, Claudin-4, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn4O35054 Gm14794-201ENSMUST00000118181 192 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Gm11943-201ENSMUST00000119473 327 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Gm15060-201ENSMUST00000119550 948 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Gm26171-201ENSMUST00000158422 131 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Gm23025-201ENSMUST00000158769 111 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
Cldn4O35054 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cldn4O35054 Gm22776-201ENSMUST00000178634 94 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Gm23767-201ENSMUST00000179278 94 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.79□□□□□ -1.8
Cldn4O35054 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Gm8676-201ENSMUST00000184206 637 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn4O35054 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn4O35054 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.79□□□□□ -1.8
Cldn4O35054 Gm43494-201ENSMUST00000197672 388 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Gm32381-201ENSMUST00000203192 476 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Gm8774-201ENSMUST00000203621 692 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Gm45006-201ENSMUST00000206078 690 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Gm44824-201ENSMUST00000207021 229 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn4O35054 AC154245.1-201ENSMUST00000224615 601 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn4O35054 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cldn4O35054 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Cldn4O35054 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cldn4O35054 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cldn4O35054 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cldn4O35054 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cldn4O35054 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cldn4O35054 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn4O35054 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn4O35054 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cldn4O35054 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn4O35054 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cldn4O35054 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.79□□□□□ -1.8
Cldn4O35054 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cldn4O35054 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cldn4O35054 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Cldn4O35054 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cldn4O35054 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cldn4O35054 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm14677-201ENSMUST00000117866 486 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm14903-201ENSMUST00000122435 537 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm25835-201ENSMUST00000158917 144 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm21638-201ENSMUST00000179473 836 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm26556-201ENSMUST00000180645 320 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm29452-201ENSMUST00000187996 313 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm28860-201ENSMUST00000188103 313 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm17966-201ENSMUST00000193453 594 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm38395-201ENSMUST00000199904 830 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm7946-201ENSMUST00000203326 958 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm19726-201ENSMUST00000205008 240 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm45080-201ENSMUST00000206648 283 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Cldn4O35054 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cldn4O35054 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cldn4O35054 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cldn4O35054 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cldn4O35054 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cldn4O35054 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm14797-201ENSMUST00000119378 1480 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC3.78□□□□□ -1.8
Cldn4O35054 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cldn4O35054 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cldn4O35054 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cldn4O35054 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.78□□□□□ -1.8
Cldn4O35054 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Cldn4O35054 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.78□□□□□ -1.81
Cldn4O35054 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.81
Cldn4O35054 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
Cldn4O35054 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cldn4O35054 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Cldn4O35054 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Cldn4O35054 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cldn4O35054 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cldn4O35054 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cldn4O35054 Gm26002-201ENSMUST00000101915 107 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms