Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trav13d-3J3QMG8 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trav13d-3J3QMG8 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trav13d-3J3QMG8 Gm25008-201ENSMUST00000083809 81 ntBASIC3.39□□□□□ -1.87
Trav13d-3J3QMG8 Gm24446-201ENSMUST00000083982 156 ntBASIC3.39□□□□□ -1.87
Trav13d-3J3QMG8 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trav13d-3J3QMG8 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trav13d-3J3QMG8 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trav13d-3J3QMG8 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trav13d-3J3QMG8 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trav13d-3J3QMG8 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.39□□□□□ -1.87
Trav13d-3J3QMG8 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm3563-201ENSMUST00000172963 1628 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm12982-201ENSMUST00000117408 190 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm14299-201ENSMUST00000117586 397 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm11219-201ENSMUST00000118565 358 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm12137-201ENSMUST00000119565 346 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm13239-201ENSMUST00000119920 637 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm12486-201ENSMUST00000120887 541 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm12900-201ENSMUST00000120919 573 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm8244-201ENSMUST00000121254 264 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm16274-201ENSMUST00000139251 592 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm23228-201ENSMUST00000157296 270 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm23231-201ENSMUST00000157299 104 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm23538-201ENSMUST00000157535 101 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm23585-201ENSMUST00000157656 102 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm25194-201ENSMUST00000177987 79 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm26556-201ENSMUST00000180645 320 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm7909-201ENSMUST00000182688 614 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Mir6938-201ENSMUST00000184173 63 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm28267-201ENSMUST00000191093 265 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm17991-201ENSMUST00000208139 297 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 AC153516.1-201ENSMUST00000217955 779 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm9309-201ENSMUST00000223537 546 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm336-201ENSMUST00000186376 1480 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.38□□□□□ -1.87
Trav13d-3J3QMG8 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm23273-201ENSMUST00000104058 135 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm24125-201ENSMUST00000104105 137 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm17132-201ENSMUST00000109542 1158 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm14899-201ENSMUST00000118673 548 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm13082-201ENSMUST00000118877 561 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm15037-201ENSMUST00000120358 259 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm14982-201ENSMUST00000121102 442 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm16327-201ENSMUST00000137146 228 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm22816-201ENSMUST00000157450 117 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm25436-201ENSMUST00000158275 145 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm23059-201ENSMUST00000158978 107 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Mir5112-201ENSMUST00000174897 60 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm8296-201ENSMUST00000185597 524 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm28666-201ENSMUST00000186649 274 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm38329-201ENSMUST00000193473 427 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm38088-201ENSMUST00000195829 241 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm6240-201ENSMUST00000208014 473 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Gm18194-201ENSMUST00000210455 481 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.37□□□□□ -1.87
Trav13d-3J3QMG8 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms