Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm11849-201ENSMUST00000121293 261 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm15167-201ENSMUST00000121997 187 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm14578-201ENSMUST00000122166 391 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm15147-201ENSMUST00000122263 483 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm23964-201ENSMUST00000157966 107 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm3191-201ENSMUST00000167139 346 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm26426-201ENSMUST00000177866 123 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm23141-201ENSMUST00000178682 94 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm26060-201ENSMUST00000180094 123 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm4842-201ENSMUST00000183237 835 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Mir6416-201ENSMUST00000183664 117 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm28717-201ENSMUST00000189950 315 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm36891-201ENSMUST00000191995 655 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm17951-201ENSMUST00000198536 496 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm44063-201ENSMUST00000203307 376 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm45387-201ENSMUST00000209792 632 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm45651-201ENSMUST00000210857 335 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 AC125405.1-201ENSMUST00000226406 589 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm19131-202ENSMUST00000203464 3208 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Mir1193-201ENSMUST00000116761 121 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm11679-201ENSMUST00000121830 779 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm25806-201ENSMUST00000122782 122 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm6632-201ENSMUST00000168425 954 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Mir5624-201ENSMUST00000176635 61 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm21726-201ENSMUST00000179654 392 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm37836-201ENSMUST00000195875 175 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm23686-201ENSMUST00000083241 164 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.75□□□□□ -1.65
Nkx6-1Q99MA9 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm12156-201ENSMUST00000119188 554 ntBASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm14831-201ENSMUST00000120253 409 ntBASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm14037-201ENSMUST00000120576 313 ntBASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm11582-201ENSMUST00000121041 236 ntBASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm14287-201ENSMUST00000121060 117 ntBASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm12924-201ENSMUST00000121747 318 ntBASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm6058-201ENSMUST00000154261 399 ntBASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm24059-201ENSMUST00000157493 312 ntBASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm26189-201ENSMUST00000179879 107 ntBASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 Gm43441-201ENSMUST00000201458 205 ntBASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.74□□□□□ -1.65
Nkx6-1Q99MA9 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms