Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm6884-201ENSMUST00000119318 615 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm28860-201ENSMUST00000188103 313 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm6651-201ENSMUST00000189471 271 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm44083-201ENSMUST00000203114 337 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm19726-201ENSMUST00000205008 240 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.42□□□□□ -1.54
Clp1Q99LI9 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 CT572985.2-201ENSMUST00000220496 211 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm26121-201ENSMUST00000083364 162 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.42□□□□□ -1.54
Clp1Q99LI9 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.42□□□□□ -1.54
Clp1Q99LI9 Gm12010-201ENSMUST00000122400 2017 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Clp1Q99LI9 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clp1Q99LI9 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Clp1Q99LI9 n-R5s202-201ENSMUST00000104517 114 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 AA413626-201ENSMUST00000121125 494 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm24113-201ENSMUST00000157477 276 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm26085-201ENSMUST00000157900 116 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm23542-201ENSMUST00000158208 96 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm5777-201ENSMUST00000177265 448 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm23047-201ENSMUST00000177661 94 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Mir7074-201ENSMUST00000183884 63 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm28957-201ENSMUST00000190174 373 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm37616-201ENSMUST00000193974 322 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC5.41□□□□□ -1.54
Clp1Q99LI9 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm43914-201ENSMUST00000203592 594 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm18423-201ENSMUST00000205144 1074 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm44583-201ENSMUST00000207478 281 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm44655-201ENSMUST00000207768 423 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm26055-201ENSMUST00000083038 107 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.41□□□□□ -1.54
Clp1Q99LI9 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.41□□□□□ -1.54
Clp1Q99LI9 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Clp1Q99LI9 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.4□□□□□ -1.54
Clp1Q99LI9 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Clp1Q99LI9 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.4□□□□□ -1.54
Clp1Q99LI9 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Clp1Q99LI9 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.4□□□□□ -1.54
Clp1Q99LI9 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
Clp1Q99LI9 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Clp1Q99LI9 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Clp1Q99LI9 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Clp1Q99LI9 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Clp1Q99LI9 Gm23422-201ENSMUST00000102000 107 ntBASIC5.4□□□□□ -1.54
Clp1Q99LI9 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Clp1Q99LI9 Gm11447-201ENSMUST00000118983 858 ntBASIC5.4□□□□□ -1.54
Clp1Q99LI9 Gm12118-201ENSMUST00000119766 532 ntBASIC5.4□□□□□ -1.54
Clp1Q99LI9 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Clp1Q99LI9 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC5.4□□□□□ -1.54
Clp1Q99LI9 Gm7953-201ENSMUST00000168278 469 ntBASIC5.4□□□□□ -1.54
Clp1Q99LI9 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Clp1Q99LI9 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.4□□□□□ -1.54
Clp1Q99LI9 Gm27286-201ENSMUST00000184934 179 ntBASIC5.4□□□□□ -1.54
Clp1Q99LI9 Mir691-201ENSMUST00000199719 78 ntBASIC5.4□□□□□ -1.54
Clp1Q99LI9 Gm45119-201ENSMUST00000207612 199 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms