Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm25967-201ENSMUST00000157168 147 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gm23957-201ENSMUST00000157209 90 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gm8224-201ENSMUST00000166178 497 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gm25412-201ENSMUST00000180258 107 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gm27952-201ENSMUST00000184748 105 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gm28339-201ENSMUST00000185845 696 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gm7142-201ENSMUST00000194232 586 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gm19726-201ENSMUST00000205008 240 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gm9370-201ENSMUST00000222787 609 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 AC118006.1-201ENSMUST00000224211 501 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gm23615-201ENSMUST00000082602 65 ntBASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
Trav6-2Q5R1I4 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm9343-201ENSMUST00000209016 2609 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm26423-201ENSMUST00000104277 128 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm12568-201ENSMUST00000117362 624 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm13379-201ENSMUST00000118053 621 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm12268-201ENSMUST00000118398 442 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm12090-201ENSMUST00000118692 758 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm12156-201ENSMUST00000119188 554 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm10075-201ENSMUST00000162030 545 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm5527-201ENSMUST00000179821 642 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm27783-201ENSMUST00000183534 105 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm28552-201ENSMUST00000190725 388 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm5731-201ENSMUST00000190969 481 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm37288-201ENSMUST00000193963 334 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm44392-201ENSMUST00000196758 115 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm43899-201ENSMUST00000203675 246 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm44754-201ENSMUST00000208155 400 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 AC099578.1-201ENSMUST00000220147 435 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 AC121542.1-201ENSMUST00000227245 721 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 AC126690.1-201ENSMUST00000228898 397 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm22979-201ENSMUST00000082609 159 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm36927-201ENSMUST00000192504 1841 ntBASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trav6-2Q5R1I4 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Trav6-2Q5R1I4 Gm45264-201ENSMUST00000210090 3995 ntBASIC2.85□□□□□ -1.95
Trav6-2Q5R1I4 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Trav6-2Q5R1I4 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Trav6-2Q5R1I4 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trav6-2Q5R1I4 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Trav6-2Q5R1I4 Gm22939-201ENSMUST00000103958 131 ntBASIC2.85□□□□□ -1.95
Trav6-2Q5R1I4 Gm6429-201ENSMUST00000117144 475 ntBASIC2.85□□□□□ -1.95
Trav6-2Q5R1I4 Gm13761-201ENSMUST00000117238 807 ntBASIC2.85□□□□□ -1.95
Trav6-2Q5R1I4 Gm14607-201ENSMUST00000119119 491 ntBASIC2.85□□□□□ -1.95
Trav6-2Q5R1I4 Gm14240-201ENSMUST00000120353 546 ntBASIC2.85□□□□□ -1.95
Trav6-2Q5R1I4 Gm12372-201ENSMUST00000121654 768 ntBASIC2.85□□□□□ -1.95
Trav6-2Q5R1I4 Gm14162-201ENSMUST00000121985 601 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms