Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm18100-201ENSMUST00000200897 452 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm44030-201ENSMUST00000204865 432 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm44259-201ENSMUST00000204996 298 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm17780-201ENSMUST00000207142 612 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 CT030242.2-201ENSMUST00000221588 148 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm18363-201ENSMUST00000221671 730 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 AC131068.1-201ENSMUST00000226891 482 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 AC164883.9-201ENSMUST00000228042 399 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Gm23443-201ENSMUST00000082916 128 ntBASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav3-3Q5R1C3 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm15560-201ENSMUST00000117107 643 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm12902-201ENSMUST00000118389 322 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm15274-201ENSMUST00000131442 291 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm21979-201ENSMUST00000139887 291 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm15259-201ENSMUST00000151262 291 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm23470-201ENSMUST00000157129 120 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm25436-201ENSMUST00000158275 145 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm25902-201ENSMUST00000158493 318 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm23365-201ENSMUST00000175019 125 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm44453-201ENSMUST00000175161 126 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm23415-201ENSMUST00000175519 83 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Mir5136-201ENSMUST00000175573 76 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm20693-201ENSMUST00000177431 211 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm25195-201ENSMUST00000177656 126 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm10067-201ENSMUST00000179462 348 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Mir8103-201ENSMUST00000183945 107 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Mir6345-201ENSMUST00000184286 128 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm29740-201ENSMUST00000193182 655 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm30341-201ENSMUST00000194363 289 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm43142-201ENSMUST00000198670 361 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm44137-201ENSMUST00000203670 367 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm8209-201ENSMUST00000206386 553 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm45072-201ENSMUST00000208673 929 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm6929-201ENSMUST00000210930 468 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm21089-201ENSMUST00000215843 325 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm18338-201ENSMUST00000222381 560 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm17872-201ENSMUST00000222550 532 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 AC157572.3-201ENSMUST00000227288 303 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm23297-201ENSMUST00000083184 127 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm22970-201ENSMUST00000083304 186 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm42888-201ENSMUST00000202425 4361 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav3-3Q5R1C3 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm24120-201ENSMUST00000103978 129 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm23133-201ENSMUST00000104255 135 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm7219-201ENSMUST00000119619 297 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm22960-201ENSMUST00000122517 104 ntBASIC2.53□□□□□ -2
Trav3-3Q5R1C3 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms