Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 DQ267100-201ENSMUST00000122600 72 ntBASIC2.65□□□□□ -1.99
Col5a1O88207 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.65□□□□□ -1.99
Col5a1O88207 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.65□□□□□ -1.99
Col5a1O88207 Gm9890-201ENSMUST00000171867 537 ntBASIC2.65□□□□□ -1.99
Col5a1O88207 Gm24082-201ENSMUST00000175175 83 ntBASIC2.65□□□□□ -1.99
Col5a1O88207 Gm24111-201ENSMUST00000175491 97 ntBASIC2.65□□□□□ -1.99
Col5a1O88207 Gm14527-201ENSMUST00000179300 639 ntBASIC2.65□□□□□ -1.99
Col5a1O88207 Gm36994-201ENSMUST00000192941 492 ntBASIC2.65□□□□□ -1.99
Col5a1O88207 Gm18423-201ENSMUST00000205144 1074 ntBASIC2.65□□□□□ -1.99
Col5a1O88207 Gm9377-201ENSMUST00000207227 623 ntBASIC2.65□□□□□ -1.99
Col5a1O88207 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC2.65□□□□□ -1.99
Col5a1O88207 Mir21a-201ENSMUST00000083521 92 ntBASIC2.65□□□□□ -1.99
Col5a1O88207 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Col5a1O88207 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
Col5a1O88207 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Col5a1O88207 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.65□□□□□ -1.99
Col5a1O88207 Gm37311-201ENSMUST00000195541 2024 ntBASIC2.64□□□□□ -1.99
Col5a1O88207 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col5a1O88207 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Col5a1O88207 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC2.64□□□□□ -1.99
Col5a1O88207 Gm4732-201ENSMUST00000118778 473 ntBASIC2.64□□□□□ -1.99
Col5a1O88207 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.64□□□□□ -1.99
Col5a1O88207 Gm22600-201ENSMUST00000157598 269 ntBASIC2.64□□□□□ -1.99
Col5a1O88207 Gm24075-201ENSMUST00000158175 72 ntBASIC2.64□□□□□ -1.99
Col5a1O88207 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col5a1O88207 Mir6386-201ENSMUST00000183558 104 ntBASIC2.64□□□□□ -1.99
Col5a1O88207 Gm27379-201ENSMUST00000183730 123 ntBASIC2.64□□□□□ -1.99
Col5a1O88207 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC2.64□□□□□ -1.99
Col5a1O88207 Gm44849-201ENSMUST00000207595 484 ntBASIC2.64□□□□□ -1.99
Col5a1O88207 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.64□□□□□ -1.99
Col5a1O88207 AC142113.2-201ENSMUST00000217425 748 ntBASIC2.64□□□□□ -1.99
Col5a1O88207 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC2.64□□□□□ -1.99
Col5a1O88207 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.64□□□□□ -1.99
Col5a1O88207 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Col5a1O88207 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col5a1O88207 Mir184-201ENSMUST00000083662 69 ntBASIC2.64□□□□□ -1.99
Col5a1O88207 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Col5a1O88207 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col5a1O88207 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col5a1O88207 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col5a1O88207 Gm42671-201ENSMUST00000198013 1604 ntBASIC2.64□□□□□ -1.99
Col5a1O88207 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
Col5a1O88207 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col5a1O88207 Gm12787-201ENSMUST00000119234 396 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm15272-201ENSMUST00000120865 233 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm12372-201ENSMUST00000121654 768 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Mup-ps15-201ENSMUST00000121741 539 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm22073-201ENSMUST00000122668 189 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Col5a1O88207 Gm25026-201ENSMUST00000175017 188 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC2.63□□□□□ -1.99
Col5a1O88207 Gm28011-201ENSMUST00000184097 175 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm27160-201ENSMUST00000184837 199 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.63□□□□□ -1.99
Col5a1O88207 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.63□□□□□ -1.99
Col5a1O88207 Gm43600-201ENSMUST00000202134 223 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm44232-201ENSMUST00000204537 225 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
Col5a1O88207 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Col5a1O88207 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.63□□□□□ -1.99
Col5a1O88207 AC158536.1-201ENSMUST00000222510 256 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm9762-201ENSMUST00000036976 444 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm7204-201ENSMUST00000062591 600 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC2.63□□□□□ -1.99
Col5a1O88207 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Col5a1O88207 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
Col5a1O88207 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Col5a1O88207 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC2.63□□□□□ -1.99
Col5a1O88207 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Col5a1O88207 Gm26143-201ENSMUST00000104480 108 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.63□□□□□ -1.99
Col5a1O88207 Gm7485-201ENSMUST00000119502 1109 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm14843-201ENSMUST00000119596 212 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm14593-201ENSMUST00000119948 294 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm15225-201ENSMUST00000120449 1017 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm23325-201ENSMUST00000157422 129 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.63□□□□□ -1.99
Col5a1O88207 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm19498-201ENSMUST00000191128 331 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC2.63□□□□□ -1.99
Col5a1O88207 Gm21006-201ENSMUST00000196930 667 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.63□□□□□ -1.99
Col5a1O88207 AC147615.1-201ENSMUST00000218914 441 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 AC134254.4-201ENSMUST00000223086 370 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 AL645546.2-201ENSMUST00000224526 265 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 CT030194.2-201ENSMUST00000225752 379 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 AC154640.2-201ENSMUST00000226324 472 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 AC154270.1-201ENSMUST00000227226 426 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Gm24698-201ENSMUST00000083883 130 ntBASIC2.63□□□□□ -1.99
Col5a1O88207 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Col5a1O88207 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Col5a1O88207 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col5a1O88207 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Col5a1O88207 Gm24142-201ENSMUST00000101960 107 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Gm25466-201ENSMUST00000103995 132 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Gm23128-201ENSMUST00000104257 132 ntBASIC2.62□□□□□ -1.99
Col5a1O88207 Gm12849-201ENSMUST00000120013 739 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms