Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC2.57□□□□□ -2
Abca4O35600 AC160130.1-201ENSMUST00000220734 2735 ntBASIC2.57□□□□□ -2
Abca4O35600 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Abca4O35600 Gm14793-201ENSMUST00000118739 311 ntBASIC2.57□□□□□ -2
Abca4O35600 Mir1946a-201ENSMUST00000158360 134 ntBASIC2.57□□□□□ -2
Abca4O35600 Gm22257-201ENSMUST00000158687 301 ntBASIC2.57□□□□□ -2
Abca4O35600 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC2.57□□□□□ -2
Abca4O35600 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.57□□□□□ -2
Abca4O35600 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.57□□□□□ -2
Abca4O35600 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC2.57□□□□□ -2
Abca4O35600 Diaph3-206ENSMUST00000226745 713 ntBASIC2.57□□□□□ -2
Abca4O35600 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Abca4O35600 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC2.57□□□□□ -2
Abca4O35600 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Abca4O35600 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Abca4O35600 Gm7974-201ENSMUST00000117154 408 ntBASIC2.56□□□□□ -2
Abca4O35600 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.56□□□□□ -2
Abca4O35600 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.56□□□□□ -2
Abca4O35600 CT030247.1-201ENSMUST00000216810 267 ntBASIC2.56□□□□□ -2
Abca4O35600 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Abca4O35600 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Abca4O35600 Gm37470-201ENSMUST00000193378 2798 ntBASIC2.56□□□□□ -2
Abca4O35600 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Abca4O35600 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Abca4O35600 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC2.56□□□□□ -2
Abca4O35600 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC2.56□□□□□ -2
Abca4O35600 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC2.56□□□□□ -2
Abca4O35600 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.56□□□□□ -2
Abca4O35600 Gm44016-201ENSMUST00000203463 164 ntBASIC2.56□□□□□ -2
Abca4O35600 Gm45879-201ENSMUST00000212521 392 ntBASIC2.56□□□□□ -2
Abca4O35600 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.56□□□□□ -2
Abca4O35600 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Abca4O35600 Gm17752-201ENSMUST00000185787 3726 ntBASIC2.55□□□□□ -2
Abca4O35600 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Abca4O35600 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Abca4O35600 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Abca4O35600 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Abca4O35600 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Abca4O35600 Mir542-201ENSMUST00000102186 85 ntBASIC2.55□□□□□ -2
Abca4O35600 Gm13121-201ENSMUST00000120637 632 ntBASIC2.55□□□□□ -2
Abca4O35600 Gm22192-201ENSMUST00000175128 85 ntBASIC2.55□□□□□ -2
Abca4O35600 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Abca4O35600 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Abca4O35600 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.55□□□□□ -2
Abca4O35600 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC2.55□□□□□ -2
Abca4O35600 Gm25632-201ENSMUST00000083112 85 ntBASIC2.55□□□□□ -2
Abca4O35600 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Abca4O35600 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Abca4O35600 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Abca4O35600 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Abca4O35600 Gm22713-201ENSMUST00000116895 130 ntBASIC2.54□□□□□ -2
Abca4O35600 Gm12387-201ENSMUST00000118573 955 ntBASIC2.54□□□□□ -2
Abca4O35600 Gm13009-201ENSMUST00000121307 267 ntBASIC2.54□□□□□ -2
Abca4O35600 Gm18560-201ENSMUST00000173463 1123 ntBASIC2.54□□□□□ -2
Abca4O35600 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.54□□□□□ -2
Abca4O35600 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.54□□□□□ -2
Abca4O35600 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Abca4O35600 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Abca4O35600 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Abca4O35600 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Abca4O35600 Gm12941-201ENSMUST00000117934 220 ntBASIC2.54□□□□□ -2
Abca4O35600 Gm15183-201ENSMUST00000118933 348 ntBASIC2.54□□□□□ -2
Abca4O35600 Gm17183-201ENSMUST00000171170 493 ntBASIC2.54□□□□□ -2
Abca4O35600 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.54□□□□□ -2
Abca4O35600 Gm19086-201ENSMUST00000190772 665 ntBASIC2.54□□□□□ -2
Abca4O35600 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.54□□□□□ -2
Abca4O35600 Gm43651-201ENSMUST00000199796 439 ntBASIC2.54□□□□□ -2
Abca4O35600 Gm45312-201ENSMUST00000210566 311 ntBASIC2.54□□□□□ -2
Abca4O35600 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.54□□□□□ -2
Abca4O35600 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.54□□□□□ -2
Abca4O35600 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Abca4O35600 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.53□□□□□ -2
Abca4O35600 Gm36969-201ENSMUST00000194551 2809 ntBASIC2.53□□□□□ -2
Abca4O35600 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Abca4O35600 Gm28002-201ENSMUST00000184832 100 ntBASIC2.53□□□□□ -2
Abca4O35600 Gm28920-201ENSMUST00000189957 699 ntBASIC2.53□□□□□ -2
Abca4O35600 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.53□□□□□ -2
Abca4O35600 Gm45031-201ENSMUST00000206800 288 ntBASIC2.53□□□□□ -2
Abca4O35600 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.53□□□□□ -2
Abca4O35600 Gm18387-201ENSMUST00000220333 702 ntBASIC2.53□□□□□ -2
Abca4O35600 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Abca4O35600 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Abca4O35600 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Abca4O35600 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.53□□□□□ -2
Abca4O35600 Gm13314-201ENSMUST00000118742 335 ntBASIC2.53□□□□□ -2
Abca4O35600 Mir8119-201ENSMUST00000183371 129 ntBASIC2.53□□□□□ -2
Abca4O35600 Gm29657-201ENSMUST00000189807 342 ntBASIC2.53□□□□□ -2
Abca4O35600 Gm20776-201ENSMUST00000189940 700 ntBASIC2.53□□□□□ -2
Abca4O35600 Gm42539-201ENSMUST00000197009 308 ntBASIC2.53□□□□□ -2
Abca4O35600 Gm43264-201ENSMUST00000202284 325 ntBASIC2.53□□□□□ -2
Abca4O35600 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.53□□□□□ -2
Abca4O35600 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.52□□□□□ -2.01
Abca4O35600 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.52□□□□□ -2.01
Abca4O35600 Mir758-201ENSMUST00000103260 81 ntBASIC2.52□□□□□ -2.01
Abca4O35600 Gm26396-201ENSMUST00000104093 132 ntBASIC2.52□□□□□ -2.01
Abca4O35600 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.52□□□□□ -2.01
Abca4O35600 Gm24638-201ENSMUST00000179807 132 ntBASIC2.52□□□□□ -2.01
Abca4O35600 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.52□□□□□ -2.01
Abca4O35600 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Abca4O35600 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms