Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm23750-201ENSMUST00000104222 132 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm12495-201ENSMUST00000119750 447 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm11909-201ENSMUST00000121424 759 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm14101-201ENSMUST00000121502 473 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm15075-201ENSMUST00000122187 477 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm11403-201ENSMUST00000122195 369 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm28255-201ENSMUST00000187101 694 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm37603-201ENSMUST00000192368 219 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm38150-201ENSMUST00000192996 452 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Trav5d-2-201ENSMUST00000196107 275 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Trav5n-2-201ENSMUST00000197136 275 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm19202-201ENSMUST00000198096 808 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 AC122332.1-201ENSMUST00000214384 285 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Mir331-201ENSMUST00000083673 96 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Mir7-2-201ENSMUST00000083675 97 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm15073-201ENSMUST00000117432 634 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm15168-201ENSMUST00000121057 316 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm22343-201ENSMUST00000122648 286 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm23213-201ENSMUST00000122715 313 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm25883-201ENSMUST00000157781 271 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm17153-201ENSMUST00000171314 490 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm25361-201ENSMUST00000179358 76 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm28717-201ENSMUST00000189950 315 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm42832-201ENSMUST00000196361 745 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm44083-201ENSMUST00000203114 337 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm44523-201ENSMUST00000205616 417 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 AL606472.1-201ENSMUST00000224628 275 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Pcdh1F7BJK1 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms