Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm13901-201ENSMUST00000137252 468 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm26099-201ENSMUST00000157248 109 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm26411-201ENSMUST00000157668 107 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Mir1934-201ENSMUST00000158127 83 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm24681-201ENSMUST00000158760 107 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm8292-201ENSMUST00000162574 396 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm20526-201ENSMUST00000173416 158 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm29356-201ENSMUST00000186935 373 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm28314-201ENSMUST00000191276 345 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm19057-201ENSMUST00000194329 1197 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm44555-201ENSMUST00000209008 148 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm45742-201ENSMUST00000212400 433 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC115289.1-201ENSMUST00000224915 522 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC121898.1-201ENSMUST00000227599 288 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC123860.1-201ENSMUST00000228033 481 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Mir101b-201ENSMUST00000083622 97 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm6207-201ENSMUST00000120075 1386 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm6228-201ENSMUST00000178856 1386 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC121598.3-201ENSMUST00000227179 1643 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm9218-201ENSMUST00000121068 2694 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm42479-201ENSMUST00000198654 1356 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm25466-201ENSMUST00000103995 132 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm15108-201ENSMUST00000116160 803 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm12902-201ENSMUST00000118389 322 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm11510-201ENSMUST00000120278 347 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Defa-ps5-201ENSMUST00000121541 279 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm15111-201ENSMUST00000122142 878 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm11819-201ENSMUST00000122192 372 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm13366-201ENSMUST00000122198 970 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm16563-201ENSMUST00000162673 423 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm16232-201ENSMUST00000162856 167 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm27220-201ENSMUST00000183453 262 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Mir7242-201ENSMUST00000183710 79 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm6801-201ENSMUST00000190697 339 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Mir3069-201ENSMUST00000198802 65 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm19039-201ENSMUST00000204363 575 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC167721.1-201ENSMUST00000217088 279 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC132315.1-201ENSMUST00000221771 390 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC166574.3-201ENSMUST00000226725 367 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm10115-201ENSMUST00000076071 1228 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm9174-201ENSMUST00000078149 255 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Mir132-201ENSMUST00000083603 66 ntBASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
Trav4-3A0A0B4J1K1 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm25526-201ENSMUST00000104332 132 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm16082-201ENSMUST00000115992 377 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm15560-201ENSMUST00000117107 643 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm6274-201ENSMUST00000118173 797 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm9308-201ENSMUST00000119073 448 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 DQ267100-201ENSMUST00000122600 72 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm25295-201ENSMUST00000122794 306 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm14389-201ENSMUST00000140453 241 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm22521-201ENSMUST00000158272 134 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm29259-201ENSMUST00000186396 694 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm29576-201ENSMUST00000188020 678 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm21489-201ENSMUST00000189668 818 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm28354-201ENSMUST00000190904 678 ntBASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trav4-3A0A0B4J1K1 Gm20915-201ENSMUST00000191575 663 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms