Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm24080-201ENSMUST00000175178 232 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Gm27903-201ENSMUST00000175482 126 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Spin2g-201ENSMUST00000178425 687 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Gm43405-201ENSMUST00000198642 337 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 AC115357.1-201ENSMUST00000227575 466 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm16005-201ENSMUST00000120515 269 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm22478-201ENSMUST00000122570 154 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm15733-201ENSMUST00000132957 242 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm25341-201ENSMUST00000157461 268 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm17655-201ENSMUST00000167969 255 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm26365-201ENSMUST00000179177 94 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm19637-201ENSMUST00000185933 579 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm37698-201ENSMUST00000192605 463 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm37164-201ENSMUST00000192809 637 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Trbv8-201ENSMUST00000194020 285 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm44332-201ENSMUST00000203712 433 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm44554-201ENSMUST00000208738 147 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm25480-201ENSMUST00000083217 133 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Trim3Q9R1R2 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm15090-201ENSMUST00000118787 1196 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm12691-201ENSMUST00000120186 456 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm11829-201ENSMUST00000121003 282 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm12578-201ENSMUST00000121244 417 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm15089-201ENSMUST00000122332 1196 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm22310-201ENSMUST00000157509 116 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm25224-201ENSMUST00000158195 68 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm28847-201ENSMUST00000186778 700 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm29365-201ENSMUST00000189461 699 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Trav12-4-201ENSMUST00000200663 271 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm18327-201ENSMUST00000202426 830 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm43979-201ENSMUST00000203179 475 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Gm7443-201ENSMUST00000206355 378 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.31□□□□□ -1.88
Trim3Q9R1R2 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trim3Q9R1R2 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms