Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm45614-201ENSMUST00000209994 721 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm7540-201ENSMUST00000219764 926 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm19326-201ENSMUST00000219818 326 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm5670-201ENSMUST00000093546 372 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.65
Nkx6-1Q99MA9 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm25419-201ENSMUST00000104215 191 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm12568-201ENSMUST00000117362 624 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm14823-201ENSMUST00000117698 238 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm9850-201ENSMUST00000117916 227 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm14688-201ENSMUST00000119169 303 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm23213-201ENSMUST00000122715 313 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Defb44-ps-201ENSMUST00000126871 219 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Mir6960-201ENSMUST00000183449 61 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Mir6907-201ENSMUST00000183764 71 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm8600-201ENSMUST00000186320 905 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm28097-201ENSMUST00000187333 366 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm5285-201ENSMUST00000193089 666 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm37732-201ENSMUST00000194377 316 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm37167-201ENSMUST00000194946 396 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm43405-201ENSMUST00000198642 337 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm42428-201ENSMUST00000198677 302 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm44016-201ENSMUST00000203463 164 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm6012-201ENSMUST00000210821 730 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm45730-201ENSMUST00000212560 395 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 AC154239.1-201ENSMUST00000228565 406 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm23406-201ENSMUST00000082537 122 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm37096-201ENSMUST00000192317 2058 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nkx6-1Q99MA9 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Snord66-201ENSMUST00000104051 75 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm7164-201ENSMUST00000117503 450 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm16216-201ENSMUST00000118970 1111 ntBASIC4.76□□□□□ -1.65
Nkx6-1Q99MA9 Gm15357-201ENSMUST00000119160 285 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms