Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm14837-201ENSMUST00000119688 206 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm12486-201ENSMUST00000120887 541 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm25264-201ENSMUST00000158519 117 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm8224-201ENSMUST00000166178 497 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm9613-201ENSMUST00000171662 196 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm27896-201ENSMUST00000175162 317 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Mir5134-201ENSMUST00000175529 78 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm13249-201ENSMUST00000177803 345 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm13144-201ENSMUST00000179385 345 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm11394-201ENSMUST00000181421 517 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Mir496b-201ENSMUST00000184935 113 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm6802-202ENSMUST00000186566 126 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm5731-201ENSMUST00000190969 481 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm7449-201ENSMUST00000194393 663 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm3010-201ENSMUST00000198805 448 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm43892-201ENSMUST00000204373 265 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm45171-201ENSMUST00000206360 736 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm45498-201ENSMUST00000210346 283 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm45400-201ENSMUST00000211603 653 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm45439-201ENSMUST00000211723 359 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm9616-201ENSMUST00000221154 781 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Mir193a-201ENSMUST00000083461 66 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.85□□□□□ -1.63
Ushbp1Q8R370 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm22269-201ENSMUST00000104002 130 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm25420-201ENSMUST00000104216 127 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm24792-201ENSMUST00000104286 128 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Cfap61-214ENSMUST00000167179 183 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Fth-ps2-201ENSMUST00000168364 516 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm27313-201ENSMUST00000183500 142 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm27254-201ENSMUST00000183926 517 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm29320-201ENSMUST00000185235 615 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm28471-201ENSMUST00000185994 615 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm29179-202ENSMUST00000186138 615 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm28598-201ENSMUST00000186490 615 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm29448-201ENSMUST00000186675 615 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm29314-201ENSMUST00000186800 615 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm28628-201ENSMUST00000187006 264 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm28253-202ENSMUST00000187971 615 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm29268-201ENSMUST00000188669 615 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm28779-201ENSMUST00000189678 323 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm29169-201ENSMUST00000189835 615 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm18291-201ENSMUST00000190791 301 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm29218-205ENSMUST00000190846 615 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm28978-201ENSMUST00000191120 615 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm37172-201ENSMUST00000191926 615 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm19418-201ENSMUST00000197436 580 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm45673-201ENSMUST00000210293 358 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm45523-201ENSMUST00000210712 799 ntBASIC4.84□□□□□ -1.63
Ushbp1Q8R370 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ushbp1Q8R370 Gm10042-201ENSMUST00000079884 78 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms