Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Mir713-201ENSMUST00000178651 108 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm25412-201ENSMUST00000180258 107 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm17929-201ENSMUST00000186851 627 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm29038-201ENSMUST00000191543 678 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm38109-201ENSMUST00000195386 181 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm42818-201ENSMUST00000198869 987 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm43227-201ENSMUST00000202239 677 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm44032-201ENSMUST00000204841 166 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Mir132-201ENSMUST00000083603 66 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm26108-201ENSMUST00000083973 191 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm6361-201ENSMUST00000091031 435 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm29730-201ENSMUST00000192986 1396 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 AC154511.1-201ENSMUST00000222578 1587 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm25213-201ENSMUST00000102388 113 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm23226-201ENSMUST00000116927 103 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm11673-201ENSMUST00000117846 331 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm5384-201ENSMUST00000120313 463 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm24289-201ENSMUST00000157629 135 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Mir7658-201ENSMUST00000184043 57 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm19503-201ENSMUST00000187109 241 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm20162-201ENSMUST00000193629 871 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm17954-201ENSMUST00000195893 607 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm42438-201ENSMUST00000197832 974 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm43841-201ENSMUST00000199491 586 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm19366-201ENSMUST00000206996 156 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm18774-201ENSMUST00000218269 601 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 AC122393.1-201ENSMUST00000226570 319 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Vps53Q8CCB4 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.78□□□□□ -1.64
Vps53Q8CCB4 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm6429-201ENSMUST00000117144 475 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm15364-201ENSMUST00000119618 585 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm14649-201ENSMUST00000121814 324 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm24724-201ENSMUST00000158230 107 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Mir5101-201ENSMUST00000175181 83 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm23568-201ENSMUST00000177960 92 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm24829-201ENSMUST00000179245 92 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm28263-201ENSMUST00000185884 400 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm29634-201ENSMUST00000188467 696 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm28699-201ENSMUST00000189193 696 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm19774-201ENSMUST00000190667 114 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm18296-201ENSMUST00000192475 783 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm3690-201ENSMUST00000211341 262 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm46994-201ENSMUST00000221523 219 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm23677-201ENSMUST00000083156 104 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Vps53Q8CCB4 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms