Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm11912-201ENSMUST00000117235 264 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm15951-201ENSMUST00000118377 400 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm12564-201ENSMUST00000119860 321 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm11830-201ENSMUST00000120175 561 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Nron-204ENSMUST00000158971 370 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm3053-201ENSMUST00000161709 616 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm30280-201ENSMUST00000192214 262 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Igkv4-65-201ENSMUST00000196986 358 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm19418-201ENSMUST00000197436 580 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm42542-201ENSMUST00000197978 268 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm44977-201ENSMUST00000205283 420 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 AC130222.1-201ENSMUST00000221198 256 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm24148-201ENSMUST00000082762 80 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Gm22829-201ENSMUST00000083771 106 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Mir471-201ENSMUST00000093596 67 ntBASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.84□□□□□ -1.47
Trim47Q8C0E3 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Trim47Q8C0E3 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Trim47Q8C0E3 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
Trim47Q8C0E3 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.48
Trim47Q8C0E3 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm24170-201ENSMUST00000104124 133 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm17014-201ENSMUST00000120765 168 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm12413-201ENSMUST00000121508 312 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm26348-201ENSMUST00000157528 240 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm5058-201ENSMUST00000187331 463 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm22897-201ENSMUST00000197860 128 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm29793-201ENSMUST00000202874 460 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm7407-201ENSMUST00000208301 568 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm45660-201ENSMUST00000210267 151 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm45252-201ENSMUST00000211579 397 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm7128-201ENSMUST00000211639 533 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 AC123656.2-201ENSMUST00000226726 227 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 AC101945.1-201ENSMUST00000226734 466 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm10038-201ENSMUST00000077233 441 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm25081-201ENSMUST00000082534 108 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Gm26128-201ENSMUST00000083170 110 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 AC124561.2-201ENSMUST00000226657 1973 ntBASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Trim47Q8C0E3 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm5362-201ENSMUST00000211968 3085 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm23424-201ENSMUST00000103889 110 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 n-R5s67-201ENSMUST00000104336 114 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm23705-201ENSMUST00000104370 130 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm12509-201ENSMUST00000118033 609 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm11693-201ENSMUST00000119625 565 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC5.82□□□□□ -1.48
Trim47Q8C0E3 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm25390-201ENSMUST00000157341 103 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm25865-201ENSMUST00000158247 104 ntBASIC5.82□□□□□ -1.48
Trim47Q8C0E3 Gm22355-201ENSMUST00000175531 96 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms