Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm14695-201ENSMUST00000121721 282 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Gm23213-201ENSMUST00000122715 313 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Gm6956-201ENSMUST00000134724 546 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Mir6418-201ENSMUST00000185075 115 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Gm28957-201ENSMUST00000190174 373 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Mir7227-201ENSMUST00000200408 59 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Gm44765-201ENSMUST00000206927 601 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Gm45365-201ENSMUST00000209489 256 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Gm17989-201ENSMUST00000211543 412 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Gm7128-201ENSMUST00000211639 533 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.74□□□□□ -1.65
Scaf4Q6PFF0 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm14220-201ENSMUST00000118114 449 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm14871-201ENSMUST00000119056 194 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm13867-201ENSMUST00000120844 395 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm12893-201ENSMUST00000121732 275 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Mir5099-201ENSMUST00000175257 74 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm24863-201ENSMUST00000179499 107 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Mir6400-201ENSMUST00000184870 92 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Ighv12-2-201ENSMUST00000191949 362 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm42643-201ENSMUST00000200504 279 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm18791-201ENSMUST00000204611 726 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm3086-202ENSMUST00000221248 310 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 AC125311.1-201ENSMUST00000226950 220 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm22169-201ENSMUST00000083229 107 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm22155-201ENSMUST00000083836 162 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Scaf4Q6PFF0 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm23424-201ENSMUST00000103889 110 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm13880-201ENSMUST00000118421 474 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm12815-201ENSMUST00000121737 135 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm13406-201ENSMUST00000121991 256 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm14578-201ENSMUST00000122166 391 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm24504-201ENSMUST00000157679 100 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm23258-201ENSMUST00000158319 106 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm17062-201ENSMUST00000166987 461 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms