Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cln3Q61124 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cln3Q61124 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cln3Q61124 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cln3Q61124 AC137842.3-201ENSMUST00000228855 2397 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cln3Q61124 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cln3Q61124 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cln3Q61124 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cln3Q61124 Gm8430-201ENSMUST00000119780 471 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Gm13396-201ENSMUST00000120617 271 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Gm8880-201ENSMUST00000121800 454 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Gm12226-201ENSMUST00000144172 876 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Gm22814-201ENSMUST00000157452 104 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Gm25883-201ENSMUST00000157781 271 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Gm22389-201ENSMUST00000158193 301 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Gm25714-201ENSMUST00000158626 296 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Gm6374-201ENSMUST00000159051 788 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.74□□□□□ -1.49
Cln3Q61124 Igkv13-64-201ENSMUST00000198143 343 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.74□□□□□ -1.49
Cln3Q61124 Gm7040-201ENSMUST00000223271 443 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cln3Q61124 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Cln3Q61124 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.74□□□□□ -1.49
Cln3Q61124 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cln3Q61124 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Cln3Q61124 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.74□□□□□ -1.49
Cln3Q61124 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cln3Q61124 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cln3Q61124 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cln3Q61124 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cln3Q61124 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Cln3Q61124 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
Cln3Q61124 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cln3Q61124 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cln3Q61124 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cln3Q61124 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.73□□□□□ -1.49
Cln3Q61124 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cln3Q61124 Gm24469-201ENSMUST00000104487 131 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Mir881-201ENSMUST00000104844 78 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm11576-201ENSMUST00000117433 417 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm15357-201ENSMUST00000119160 285 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm11761-201ENSMUST00000121392 445 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm14775-201ENSMUST00000122089 310 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cln3Q61124 Gm17065-201ENSMUST00000165245 239 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cln3Q61124 Gm26189-201ENSMUST00000179879 107 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Mir6416-201ENSMUST00000183664 117 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm29031-201ENSMUST00000185316 614 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm29000-201ENSMUST00000185444 614 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm28204-201ENSMUST00000185934 614 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm28290-201ENSMUST00000186505 614 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm28161-201ENSMUST00000186669 614 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm29352-201ENSMUST00000188054 544 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm28749-209ENSMUST00000189599 614 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm33163-201ENSMUST00000194504 614 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Cln3Q61124 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cln3Q61124 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.73□□□□□ -1.49
Cln3Q61124 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cln3Q61124 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Cln3Q61124 Gm43663-201ENSMUST00000198643 1505 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC5.73□□□□□ -1.49
Cln3Q61124 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cln3Q61124 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cln3Q61124 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cln3Q61124 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.72□□□□□ -1.49
Cln3Q61124 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cln3Q61124 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cln3Q61124 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cln3Q61124 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cln3Q61124 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cln3Q61124 Gm23294-201ENSMUST00000104150 164 ntBASIC5.72□□□□□ -1.49
Cln3Q61124 Gm25915-201ENSMUST00000104265 126 ntBASIC5.72□□□□□ -1.49
Cln3Q61124 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cln3Q61124 Gm14706-201ENSMUST00000117744 255 ntBASIC5.72□□□□□ -1.49
Cln3Q61124 Gm13491-201ENSMUST00000118267 235 ntBASIC5.72□□□□□ -1.49
Cln3Q61124 Gm11935-201ENSMUST00000118608 399 ntBASIC5.72□□□□□ -1.49
Cln3Q61124 Gm12564-201ENSMUST00000119860 321 ntBASIC5.72□□□□□ -1.49
Cln3Q61124 Trav20-201ENSMUST00000142754 347 ntBASIC5.72□□□□□ -1.49
Cln3Q61124 Zakit-201ENSMUST00000157677 308 ntBASIC5.72□□□□□ -1.49
Cln3Q61124 Gm23759-201ENSMUST00000158351 268 ntBASIC5.72□□□□□ -1.49
Cln3Q61124 Gm16125-201ENSMUST00000159003 339 ntBASIC5.72□□□□□ -1.49
Cln3Q61124 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cln3Q61124 Gm27492-201ENSMUST00000185194 187 ntBASIC5.72□□□□□ -1.49
Cln3Q61124 Gm28534-201ENSMUST00000187744 676 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms