Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm24443-201ENSMUST00000157242 132 ntBASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 Gm27505-201ENSMUST00000185071 110 ntBASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr844-201ENSMUST00000054106 930 ntBASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 Snora23-201ENSMUST00000082517 184 ntBASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav6d-4Q5R1I0 Gm15095-201ENSMUST00000118996 1430 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Gm15272-201ENSMUST00000120865 233 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Gm19203-201ENSMUST00000174049 939 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Snord93-201ENSMUST00000175580 71 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Gm37629-201ENSMUST00000193635 1050 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Gm43975-201ENSMUST00000203023 481 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Gm34314-201ENSMUST00000203622 367 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Gm45063-201ENSMUST00000203726 472 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Gm24817-201ENSMUST00000093672 105 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 BC051076-202ENSMUST00000199477 2868 ntBASIC2.35□□□□□ -2.03
Trav6d-4Q5R1I0 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Gm14448-201ENSMUST00000116383 210 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Gm11433-201ENSMUST00000118318 228 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 DQ267100-201ENSMUST00000122600 72 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Gm22849-201ENSMUST00000157713 307 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Gm26041-201ENSMUST00000158148 108 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Gm3370-201ENSMUST00000171785 500 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Mir5098-201ENSMUST00000175320 82 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Mir7242-201ENSMUST00000183710 79 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Mir6916-201ENSMUST00000184514 63 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Gm7634-201ENSMUST00000185778 553 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Gm17967-201ENSMUST00000195319 647 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 AC099578.1-201ENSMUST00000220147 435 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trav6d-4Q5R1I0 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.34□□□□□ -2.04
Trav6d-4Q5R1I0 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm23128-201ENSMUST00000104257 132 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm24890-201ENSMUST00000104389 102 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm17117-201ENSMUST00000163665 299 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm25025-201ENSMUST00000175018 111 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm25528-201ENSMUST00000180264 132 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm8649-201ENSMUST00000181799 233 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm28146-201ENSMUST00000185517 701 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm37007-201ENSMUST00000194234 319 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm19080-201ENSMUST00000196082 550 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm23128-202ENSMUST00000196578 133 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 AC124399.1-201ENSMUST00000218334 590 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm8274-201ENSMUST00000219820 463 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Gm10025-201ENSMUST00000079568 372 ntBASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav6d-4Q5R1I0 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms