Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.22□□□□□ -1.57
Vti1aO89116 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Vti1aO89116 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Vti1aO89116 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vti1aO89116 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Vti1aO89116 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Vti1aO89116 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Vti1aO89116 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.21□□□□□ -1.57
Vti1aO89116 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Vti1aO89116 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
Vti1aO89116 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Vti1aO89116 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Vti1aO89116 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Vti1aO89116 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Vti1aO89116 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Vti1aO89116 Gm23608-201ENSMUST00000104545 128 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Mir879-201ENSMUST00000104703 76 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.21□□□□□ -1.58
Vti1aO89116 Gm12683-201ENSMUST00000117528 415 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm12852-201ENSMUST00000119478 719 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm9043-201ENSMUST00000119677 314 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm4852-201ENSMUST00000121202 729 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm14765-201ENSMUST00000121954 326 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm7840-201ENSMUST00000122086 533 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm26034-201ENSMUST00000158154 116 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm22534-201ENSMUST00000158173 104 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm24757-201ENSMUST00000176987 371 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm44468-201ENSMUST00000199516 105 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm43083-201ENSMUST00000199594 476 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm43407-201ENSMUST00000199816 317 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.21□□□□□ -1.58
Vti1aO89116 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Vti1aO89116 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
Vti1aO89116 Gm45438-201ENSMUST00000210242 564 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Gm6929-201ENSMUST00000210930 468 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.21□□□□□ -1.58
Vti1aO89116 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.21□□□□□ -1.58
Vti1aO89116 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Vti1aO89116 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Vti1aO89116 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Vti1aO89116 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Vti1aO89116 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.21□□□□□ -1.58
Vti1aO89116 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Vti1aO89116 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Vti1aO89116 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Vti1aO89116 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Vti1aO89116 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Vti1aO89116 Mir599-201ENSMUST00000102378 88 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm14304-201ENSMUST00000117272 446 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm15012-201ENSMUST00000119176 106 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Vti1aO89116 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.2□□□□□ -1.58
Vti1aO89116 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Vti1aO89116 Gm2389-201ENSMUST00000160487 189 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm5263-201ENSMUST00000163646 601 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm19898-201ENSMUST00000177490 251 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm11395-201ENSMUST00000181011 499 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm11394-201ENSMUST00000181421 517 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm26983-201ENSMUST00000182051 388 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm27528-201ENSMUST00000183544 205 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm19193-201ENSMUST00000190263 590 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
Vti1aO89116 Ighv1-6-201ENSMUST00000193849 293 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC5.2□□□□□ -1.58
Vti1aO89116 Gm33354-201ENSMUST00000195448 906 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm42566-201ENSMUST00000197120 643 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm43669-201ENSMUST00000198229 436 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm44989-201ENSMUST00000204749 217 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm45105-201ENSMUST00000207824 397 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Vti1aO89116 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Vti1aO89116 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Vti1aO89116 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Vti1aO89116 Gm37661-201ENSMUST00000191863 1550 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Vti1aO89116 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.2□□□□□ -1.58
Vti1aO89116 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Vti1aO89116 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Vti1aO89116 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Vti1aO89116 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC5.19□□□□□ -1.58
Vti1aO89116 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.19□□□□□ -1.58
Vti1aO89116 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Vti1aO89116 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Vti1aO89116 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.19□□□□□ -1.58
Vti1aO89116 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Vti1aO89116 Gm12112-201ENSMUST00000117772 231 ntBASIC5.19□□□□□ -1.58
Vti1aO89116 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC5.19□□□□□ -1.58
Vti1aO89116 Gm15988-201ENSMUST00000118677 367 ntBASIC5.19□□□□□ -1.58
Vti1aO89116 Gm7312-201ENSMUST00000118798 469 ntBASIC5.19□□□□□ -1.58
Vti1aO89116 Gm15333-201ENSMUST00000118825 364 ntBASIC5.19□□□□□ -1.58
Vti1aO89116 Gm9078-201ENSMUST00000119126 617 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms