Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm26077-201ENSMUST00000104064 123 ntBASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Gm14586-201ENSMUST00000119571 408 ntBASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Gm37455-201ENSMUST00000191993 529 ntBASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Mir184-201ENSMUST00000083662 69 ntBASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Gm43648-201ENSMUST00000197775 2485 ntBASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Gm14977-201ENSMUST00000121626 812 ntBASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Gm23967-201ENSMUST00000175062 78 ntBASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Gm37807-201ENSMUST00000194310 190 ntBASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Rny1-201ENSMUST00000083767 112 ntBASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Gm3956-201ENSMUST00000164882 2560 ntBASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Col6a3E9PWQ3 Gm38081-201ENSMUST00000192680 1645 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Gm23043-201ENSMUST00000157890 109 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Mir7242-201ENSMUST00000183710 79 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Gm11352-201ENSMUST00000119264 517 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 AC132384.13-201ENSMUST00000219556 1159 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Gm25832-201ENSMUST00000104140 130 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Gm12941-201ENSMUST00000117934 220 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Gm24858-201ENSMUST00000158058 323 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Gm18388-201ENSMUST00000222339 557 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.69□□□□□ -1.98
Col6a3E9PWQ3 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Gm23325-201ENSMUST00000157422 129 ntBASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 AC162934.1-201ENSMUST00000222880 309 ntBASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Gm42446-201ENSMUST00000199783 3284 ntBASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 BC055308-201ENSMUST00000193380 2538 ntBASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Gm29668-201ENSMUST00000187802 315 ntBASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Neat1-201ENSMUST00000173672 20771 ntBASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col6a3E9PWQ3 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Mir499-201ENSMUST00000102357 79 ntBASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Gm22793-201ENSMUST00000157227 330 ntBASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Gm27894-201ENSMUST00000184177 92 ntBASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 CT025577.1-201ENSMUST00000220862 2846 ntBASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Gm6361-201ENSMUST00000091031 435 ntBASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Gm37393-201ENSMUST00000195118 3870 ntBASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Gm16327-201ENSMUST00000137146 228 ntBASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Gm4528-201ENSMUST00000207905 551 ntBASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Gm9818-201ENSMUST00000050900 255 ntBASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col6a3E9PWQ3 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm43024-201ENSMUST00000196770 4352 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm13122-201ENSMUST00000118380 453 ntBASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC2.66□□□□□ -1.98
Col6a3E9PWQ3 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms