Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.11□□□□□ -2.07
Col6a5A6H584 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Col6a5A6H584 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm16017-201ENSMUST00000119834 208 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm13009-201ENSMUST00000121307 267 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Snord92-201ENSMUST00000175548 85 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Mir6363-201ENSMUST00000184880 114 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm45395-201ENSMUST00000209891 559 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm7214-201ENSMUST00000222428 272 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm24950-201ENSMUST00000082768 191 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm23971-201ENSMUST00000083317 191 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm23849-201ENSMUST00000083833 191 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm26316-201ENSMUST00000083886 191 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Rnu2-10-201ENSMUST00000084010 191 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm37311-201ENSMUST00000195541 2024 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col6a5A6H584 Mir758-201ENSMUST00000103260 81 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm26423-201ENSMUST00000104277 128 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm25496-201ENSMUST00000104430 120 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm4596-201ENSMUST00000117197 442 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm6444-201ENSMUST00000119611 458 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm42758-201ENSMUST00000202146 283 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col6a5A6H584 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 BC022960-201ENSMUST00000119987 1815 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.1□□□□□ -2.07
Col6a5A6H584 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col6a5A6H584 Gm14793-201ENSMUST00000118739 311 ntBASIC2.09□□□□□ -2.07
Col6a5A6H584 Gm13121-201ENSMUST00000120637 632 ntBASIC2.09□□□□□ -2.07
Col6a5A6H584 Gm25161-201ENSMUST00000158913 132 ntBASIC2.09□□□□□ -2.07
Col6a5A6H584 Gm17183-201ENSMUST00000171170 493 ntBASIC2.09□□□□□ -2.07
Col6a5A6H584 Mir3968-201ENSMUST00000175355 100 ntBASIC2.09□□□□□ -2.07
Col6a5A6H584 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.09□□□□□ -2.07
Col6a5A6H584 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.09□□□□□ -2.07
Col6a5A6H584 Gm42927-201ENSMUST00000200624 3841 ntBASIC2.09□□□□□ -2.07
Col6a5A6H584 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.09□□□□□ -2.07
Col6a5A6H584 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col6a5A6H584 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC2.09□□□□□ -2.07
Col6a5A6H584 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Col6a5A6H584 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.09□□□□□ -2.07
Col6a5A6H584 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 Gm23472-201ENSMUST00000101806 191 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 Mir682-201ENSMUST00000102281 96 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 Gm22713-201ENSMUST00000116895 130 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 Gm14586-201ENSMUST00000119571 408 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Col6a5A6H584 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.09□□□□□ -2.08
Col6a5A6H584 Gm24497-201ENSMUST00000177868 191 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 Gm25939-201ENSMUST00000179876 191 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Col6a5A6H584 Gm5268-201ENSMUST00000189212 940 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 Gm17989-201ENSMUST00000211543 412 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 Gm23444-201ENSMUST00000082922 191 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Col6a5A6H584 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
Col6a5A6H584 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Col6a5A6H584 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
Col6a5A6H584 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Col6a5A6H584 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.09□□□□□ -2.08
Col6a5A6H584 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.09□□□□□ -2.08
Col6a5A6H584 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col6a5A6H584 Gm43648-201ENSMUST00000197775 2485 ntBASIC2.08□□□□□ -2.08
Col6a5A6H584 Gm12956-201ENSMUST00000122184 414 ntBASIC2.08□□□□□ -2.08
Col6a5A6H584 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.08□□□□□ -2.08
Col6a5A6H584 Gm25836-201ENSMUST00000158918 123 ntBASIC2.08□□□□□ -2.08
Col6a5A6H584 Gm28637-201ENSMUST00000179424 345 ntBASIC2.08□□□□□ -2.08
Col6a5A6H584 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.08□□□□□ -2.08
Col6a5A6H584 Gm43295-201ENSMUST00000201439 412 ntBASIC2.08□□□□□ -2.08
Col6a5A6H584 Gm19253-201ENSMUST00000204279 307 ntBASIC2.08□□□□□ -2.08
Col6a5A6H584 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.08□□□□□ -2.08
Col6a5A6H584 Gm22155-201ENSMUST00000083836 162 ntBASIC2.08□□□□□ -2.08
Col6a5A6H584 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Col6a5A6H584 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col6a5A6H584 Gm38069-201ENSMUST00000195360 2144 ntBASIC2.08□□□□□ -2.08
Col6a5A6H584 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col6a5A6H584 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC2.08□□□□□ -2.08
Col6a5A6H584 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
Col6a5A6H584 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.08□□□□□ -2.08
Col6a5A6H584 Gm44675-201ENSMUST00000208188 2927 ntBASIC2.08□□□□□ -2.08
Col6a5A6H584 Gm10484-201ENSMUST00000196372 4759 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms