Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm26018-201ENSMUST00000104406 128 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm23910-201ENSMUST00000104597 132 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm22676-201ENSMUST00000116972 129 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm13887-201ENSMUST00000119009 344 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm13557-201ENSMUST00000120771 382 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm23219-201ENSMUST00000158123 87 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Scarna6-201ENSMUST00000158656 265 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Mir6335-201ENSMUST00000184081 98 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Mir6986-201ENSMUST00000184483 58 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm42886-201ENSMUST00000199214 466 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm44776-201ENSMUST00000207212 381 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm3816-201ENSMUST00000209803 433 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm33601-201ENSMUST00000210001 961 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm28392-201ENSMUST00000077630 393 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm24611-201ENSMUST00000083272 107 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Mir375-201ENSMUST00000083682 64 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nubp1Q9R060 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nubp1Q9R060 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.44□□□□□ -1.54
Nubp1Q9R060 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.44□□□□□ -1.54
Nubp1Q9R060 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Nubp1Q9R060 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Mir465b-1-201ENSMUST00000103940 79 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 Mir465b-2-201ENSMUST00000104662 79 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 Gm15426-201ENSMUST00000117823 556 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 Gm14714-201ENSMUST00000119743 439 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 Gm24839-201ENSMUST00000122602 107 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 Gm25152-201ENSMUST00000157117 114 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 Gm25392-201ENSMUST00000157335 297 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Mirt2-201ENSMUST00000175179 285 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 AC155712.1-201ENSMUST00000219704 160 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 CT009713.6-201ENSMUST00000223615 294 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 Mir337-201ENSMUST00000083592 97 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Nubp1Q9R060 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 AC156636.2-201ENSMUST00000218845 4557 ntBASIC5.43□□□□□ -1.54
Nubp1Q9R060 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nubp1Q9R060 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.42□□□□□ -1.54
Nubp1Q9R060 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Nubp1Q9R060 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms