Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.22□□□□□ -2.05
Six6Q9QZ28 Gm18346-201ENSMUST00000216782 325 ntBASIC2.22□□□□□ -2.05
Six6Q9QZ28 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.22□□□□□ -2.05
Six6Q9QZ28 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.22□□□□□ -2.05
Six6Q9QZ28 Gm9845-201ENSMUST00000056409 598 ntBASIC2.22□□□□□ -2.05
Six6Q9QZ28 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Six6Q9QZ28 Gm10115-201ENSMUST00000076071 1228 ntBASIC2.22□□□□□ -2.05
Six6Q9QZ28 Gm13340-201ENSMUST00000117219 1545 ntBASIC2.22□□□□□ -2.05
Six6Q9QZ28 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
Six6Q9QZ28 Gm6300-201ENSMUST00000192393 1498 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm11576-201ENSMUST00000117433 417 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm13771-201ENSMUST00000117988 238 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm11433-201ENSMUST00000118318 228 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm13913-201ENSMUST00000121126 260 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm25945-201ENSMUST00000122484 135 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Six6Q9QZ28 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.21□□□□□ -2.06
Six6Q9QZ28 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm25360-201ENSMUST00000178786 191 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm6757-201ENSMUST00000189810 1706 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm44625-201ENSMUST00000207838 1561 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC2.21□□□□□ -2.06
Six6Q9QZ28 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC2.21□□□□□ -2.06
Six6Q9QZ28 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 AC166574.3-201ENSMUST00000226725 367 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Six6Q9QZ28 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Six6Q9QZ28 Olfr480-201ENSMUST00000071658 1029 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
Six6Q9QZ28 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.21□□□□□ -2.06
Six6Q9QZ28 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
Six6Q9QZ28 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gm15480-201ENSMUST00000120442 519 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gm26411-201ENSMUST00000157668 107 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gm23223-201ENSMUST00000158119 127 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gm25835-201ENSMUST00000158917 144 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gm16236-201ENSMUST00000159588 379 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gm16563-201ENSMUST00000162673 423 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Mir6971-201ENSMUST00000183497 63 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gm28803-201ENSMUST00000190385 764 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gm34779-201ENSMUST00000210036 263 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Gm23736-201ENSMUST00000082553 75 ntBASIC2.2□□□□□ -2.06
Six6Q9QZ28 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Six6Q9QZ28 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Six6Q9QZ28 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm11460-201ENSMUST00000118200 361 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm23600-201ENSMUST00000157260 71 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm26045-201ENSMUST00000157862 97 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm16285-201ENSMUST00000162999 347 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Mir5098-201ENSMUST00000175320 82 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm27220-201ENSMUST00000183453 262 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Mir7020-201ENSMUST00000183787 70 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Mir8118-201ENSMUST00000183962 129 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm29104-201ENSMUST00000186304 222 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm29553-201ENSMUST00000189692 279 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm17951-201ENSMUST00000198536 496 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Six6Q9QZ28 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 AC124562.1-201ENSMUST00000224673 337 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Olfr815-201ENSMUST00000071557 951 ntBASIC2.19□□□□□ -2.06
Six6Q9QZ28 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Six6Q9QZ28 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms