Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 Gm26988-201ENSMUST00000183296 945 ntBASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 Mir6408-201ENSMUST00000183643 91 ntBASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 Gm18486-201ENSMUST00000184040 298 ntBASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 Gm28141-201ENSMUST00000186676 342 ntBASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 Gm38329-201ENSMUST00000193473 427 ntBASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 Gm43704-201ENSMUST00000196164 496 ntBASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 Gm23102-201ENSMUST00000083724 116 ntBASIC3.23□□□□□ -1.89
Upk3aQ9JKX8 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm13379-201ENSMUST00000118053 621 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm13273-201ENSMUST00000119737 159 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm12739-201ENSMUST00000119769 382 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm25295-201ENSMUST00000122794 306 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm23505-201ENSMUST00000158989 130 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm10075-201ENSMUST00000162030 545 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm5929-201ENSMUST00000166883 487 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Mir6914-201ENSMUST00000184999 69 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm28069-201ENSMUST00000189926 214 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm37319-201ENSMUST00000193500 636 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm18660-201ENSMUST00000199542 629 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 AC133654.1-201ENSMUST00000228411 672 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Mir325-201ENSMUST00000083491 98 ntBASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Upk3aQ9JKX8 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.21□□□□□ -1.89
Upk3aQ9JKX8 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
Upk3aQ9JKX8 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Upk3aQ9JKX8 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Upk3aQ9JKX8 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm12507-201ENSMUST00000119155 415 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm15061-201ENSMUST00000121076 1046 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm15279-201ENSMUST00000155593 288 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm24914-201ENSMUST00000157285 313 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm9587-201ENSMUST00000172449 454 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm17935-201ENSMUST00000196649 772 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm45420-201ENSMUST00000211243 425 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 AC153522.1-201ENSMUST00000220047 1090 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm26437-201ENSMUST00000082595 105 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Olfr203-201ENSMUST00000089305 924 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Upk3aQ9JKX8 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Upk3aQ9JKX8 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.2□□□□□ -1.9
Upk3aQ9JKX8 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.2□□□□□ -1.9
Upk3aQ9JKX8 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.2□□□□□ -1.9
Upk3aQ9JKX8 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.2□□□□□ -1.9
Upk3aQ9JKX8 Gm24831-201ENSMUST00000116778 126 ntBASIC3.2□□□□□ -1.9
Upk3aQ9JKX8 Gm15988-201ENSMUST00000118677 367 ntBASIC3.2□□□□□ -1.9
Upk3aQ9JKX8 Gm14119-201ENSMUST00000119511 235 ntBASIC3.2□□□□□ -1.9
Upk3aQ9JKX8 Gm12276-201ENSMUST00000121709 301 ntBASIC3.2□□□□□ -1.9
Upk3aQ9JKX8 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Upk3aQ9JKX8 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms