Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm22034-201ENSMUST00000157283 134 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm5929-201ENSMUST00000166883 487 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm19080-201ENSMUST00000196082 550 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm43198-201ENSMUST00000200927 326 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm35876-201ENSMUST00000205044 459 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm30674-201ENSMUST00000214523 392 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.15□□□□□ -1.9
Cdc40Q9DC48 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Cdc40Q9DC48 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.15□□□□□ -1.9
Cdc40Q9DC48 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.15□□□□□ -1.9
Cdc40Q9DC48 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.9
Cdc40Q9DC48 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Mir592-201ENSMUST00000102113 96 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Mir804-201ENSMUST00000103251 95 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm13228-201ENSMUST00000118937 634 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm23583-201ENSMUST00000158533 289 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm23860-201ENSMUST00000179446 132 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm20574-201ENSMUST00000182867 917 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm29513-201ENSMUST00000185741 202 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm36776-201ENSMUST00000207006 203 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm35405-201ENSMUST00000218754 400 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Olfr844-201ENSMUST00000054106 930 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm4987-201ENSMUST00000078326 408 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm10212-201ENSMUST00000087884 324 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.15□□□□□ -1.91
Cdc40Q9DC48 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm9432-201ENSMUST00000117810 759 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm12722-201ENSMUST00000118507 493 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm9043-201ENSMUST00000119677 314 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm14534-201ENSMUST00000120045 357 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm12858-201ENSMUST00000121913 208 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm25967-201ENSMUST00000157168 147 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm25341-201ENSMUST00000157461 268 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm24138-201ENSMUST00000157572 114 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm24730-201ENSMUST00000158228 117 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm24002-201ENSMUST00000158456 104 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm42454-201ENSMUST00000196805 1181 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm42621-201ENSMUST00000198114 275 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm43415-201ENSMUST00000201934 750 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm44016-201ENSMUST00000203463 164 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm45380-201ENSMUST00000210465 315 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm39147-201ENSMUST00000211376 465 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cdc40Q9DC48 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms