Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm26263-201ENSMUST00000083281 164 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm25793-201ENSMUST00000083287 107 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 AC112972.2-201ENSMUST00000228702 2210 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Nkx6-1Q99MA9 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Mir592-201ENSMUST00000102113 96 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm22493-201ENSMUST00000104494 132 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm14628-201ENSMUST00000117508 635 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm12235-201ENSMUST00000118596 170 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm7840-201ENSMUST00000122086 533 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm24113-201ENSMUST00000157477 276 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm23906-201ENSMUST00000157573 128 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm25913-201ENSMUST00000157617 135 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm20526-201ENSMUST00000173416 158 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm23660-201ENSMUST00000178362 79 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm24088-201ENSMUST00000179100 79 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm28399-201ENSMUST00000186221 318 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm28572-201ENSMUST00000187444 318 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm29365-201ENSMUST00000189461 699 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm8939-201ENSMUST00000192577 964 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm18551-201ENSMUST00000195594 642 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm42776-201ENSMUST00000198031 406 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm4321-201ENSMUST00000200520 442 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm42458-201ENSMUST00000201914 369 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm7726-201ENSMUST00000206241 231 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm7040-201ENSMUST00000223271 443 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm23875-201ENSMUST00000083711 318 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nkx6-1Q99MA9 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm11790-201ENSMUST00000119569 455 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm11584-201ENSMUST00000120636 325 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm12486-201ENSMUST00000120887 541 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm14732-201ENSMUST00000121372 545 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm22177-201ENSMUST00000175002 158 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm27760-201ENSMUST00000185048 114 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm37878-201ENSMUST00000192108 387 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm44214-201ENSMUST00000204153 606 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm19126-201ENSMUST00000207896 509 ntBASIC4.78□□□□□ -1.64
Nkx6-1Q99MA9 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms