Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clp1Q99LI9 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.47□□□□□ -1.53
Clp1Q99LI9 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.47□□□□□ -1.53
Clp1Q99LI9 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.47□□□□□ -1.53
Clp1Q99LI9 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Clp1Q99LI9 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clp1Q99LI9 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clp1Q99LI9 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.47□□□□□ -1.53
Clp1Q99LI9 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.47□□□□□ -1.53
Clp1Q99LI9 AC137842.3-201ENSMUST00000228855 2397 ntBASIC5.47□□□□□ -1.53
Clp1Q99LI9 AC160115.1-201ENSMUST00000224678 1574 ntBASIC5.46□□□□□ -1.53
Clp1Q99LI9 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.46□□□□□ -1.53
Clp1Q99LI9 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Clp1Q99LI9 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm13664-201ENSMUST00000117304 345 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm11633-201ENSMUST00000118176 444 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm14627-201ENSMUST00000118931 567 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm8217-201ENSMUST00000119136 465 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm7840-201ENSMUST00000122086 533 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm29350-201ENSMUST00000189141 541 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm38080-201ENSMUST00000194035 268 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm20056-201ENSMUST00000194813 519 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm44391-201ENSMUST00000198490 93 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm6051-201ENSMUST00000201529 352 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm43039-201ENSMUST00000202883 963 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm44820-201ENSMUST00000207420 396 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm45200-201ENSMUST00000207434 919 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 AC160031.2-201ENSMUST00000218242 274 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 AC125311.1-201ENSMUST00000226950 220 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm23406-201ENSMUST00000082537 122 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm22423-201ENSMUST00000082861 184 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm24045-201ENSMUST00000083113 98 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm25937-201ENSMUST00000083912 107 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
Clp1Q99LI9 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.46□□□□□ -1.54
Clp1Q99LI9 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm14753-201ENSMUST00000118503 246 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm11761-201ENSMUST00000121392 445 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm15167-201ENSMUST00000121997 187 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm22073-201ENSMUST00000122668 189 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm25103-201ENSMUST00000122671 318 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm23214-201ENSMUST00000122716 157 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm24534-201ENSMUST00000157949 291 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm26034-201ENSMUST00000158154 116 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm22891-201ENSMUST00000158641 164 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm16125-201ENSMUST00000159003 339 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm38150-201ENSMUST00000192996 452 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm9722-201ENSMUST00000194568 802 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm29781-201ENSMUST00000203862 478 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm44266-201ENSMUST00000205235 500 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm17999-201ENSMUST00000211568 542 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 AC133598.4-202ENSMUST00000225267 469 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm5215-201ENSMUST00000054380 405 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Clp1Q99LI9 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.45□□□□□ -1.54
Clp1Q99LI9 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms