Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Gm24928-201ENSMUST00000083399 107 ntBASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Gm25897-201ENSMUST00000083709 107 ntBASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Vps53Q8CCB4 AC167192.3-201ENSMUST00000224096 1567 ntBASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Vps53Q8CCB4 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Gm26187-201ENSMUST00000157693 101 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Gm25667-201ENSMUST00000157701 275 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Gm24503-201ENSMUST00000158454 135 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Gm25748-201ENSMUST00000175487 70 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Gm25699-201ENSMUST00000082896 167 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Vps53Q8CCB4 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm14607-201ENSMUST00000119119 491 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm13677-201ENSMUST00000120739 595 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm24965-201ENSMUST00000157922 106 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm17109-201ENSMUST00000163985 358 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm25999-201ENSMUST00000175398 133 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm21754-201ENSMUST00000177550 479 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm36954-201ENSMUST00000195362 363 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm18507-201ENSMUST00000218855 525 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Vps53Q8CCB4 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Igkv13-87-201ENSMUST00000114214 286 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm25507-201ENSMUST00000116981 144 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm14624-201ENSMUST00000117746 192 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm5060-201ENSMUST00000120072 599 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm6565-201ENSMUST00000121217 438 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm14977-201ENSMUST00000121626 812 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm14766-201ENSMUST00000121689 367 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm22453-201ENSMUST00000122801 318 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm22076-201ENSMUST00000158601 84 ntBASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Vps53Q8CCB4 Gm3191-201ENSMUST00000167139 346 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms