Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm11576-201ENSMUST00000117433 417 ntBASIC3.2□□□□□ -1.9
Six4Q61321 Gm13228-201ENSMUST00000118937 634 ntBASIC3.2□□□□□ -1.9
Six4Q61321 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.2□□□□□ -1.9
Six4Q61321 Gm15111-201ENSMUST00000122142 878 ntBASIC3.2□□□□□ -1.9
Six4Q61321 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.2□□□□□ -1.9
Six4Q61321 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Six4Q61321 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.2□□□□□ -1.9
Six4Q61321 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.2□□□□□ -1.9
Six4Q61321 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.2□□□□□ -1.9
Six4Q61321 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.2□□□□□ -1.9
Six4Q61321 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.2□□□□□ -1.9
Six4Q61321 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.2□□□□□ -1.9
Six4Q61321 Gm18602-201ENSMUST00000209794 851 ntBASIC3.2□□□□□ -1.9
Six4Q61321 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.2□□□□□ -1.9
Six4Q61321 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.2□□□□□ -1.9
Six4Q61321 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.2□□□□□ -1.9
Six4Q61321 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.2□□□□□ -1.9
Six4Q61321 AC154730.1-201ENSMUST00000227874 816 ntBASIC3.2□□□□□ -1.9
Six4Q61321 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Six4Q61321 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Six4Q61321 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Six4Q61321 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.2□□□□□ -1.9
Six4Q61321 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Six4Q61321 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Six4Q61321 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Six4Q61321 Gm14591-201ENSMUST00000120407 518 ntBASIC3.19□□□□□ -1.9
Six4Q61321 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.19□□□□□ -1.9
Six4Q61321 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.19□□□□□ -1.9
Six4Q61321 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC3.19□□□□□ -1.9
Six4Q61321 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Six4Q61321 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Six4Q61321 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Six4Q61321 Mir7658-201ENSMUST00000184043 57 ntBASIC3.19□□□□□ -1.9
Six4Q61321 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.19□□□□□ -1.9
Six4Q61321 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC3.19□□□□□ -1.9
Six4Q61321 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.19□□□□□ -1.9
Six4Q61321 Gm43601-201ENSMUST00000196294 945 ntBASIC3.19□□□□□ -1.9
Six4Q61321 Gm44118-201ENSMUST00000204665 229 ntBASIC3.19□□□□□ -1.9
Six4Q61321 Gm45778-201ENSMUST00000211959 153 ntBASIC3.19□□□□□ -1.9
Six4Q61321 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.19□□□□□ -1.9
Six4Q61321 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.19□□□□□ -1.9
Six4Q61321 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.19□□□□□ -1.9
Six4Q61321 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.19□□□□□ -1.9
Six4Q61321 Gm7204-201ENSMUST00000062591 600 ntBASIC3.19□□□□□ -1.9
Six4Q61321 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Six4Q61321 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Six4Q61321 Gm22829-201ENSMUST00000083771 106 ntBASIC3.19□□□□□ -1.9
Six4Q61321 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Six4Q61321 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Six4Q61321 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Six4Q61321 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Six4Q61321 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.19□□□□□ -1.9
Six4Q61321 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.19□□□□□ -1.9
Six4Q61321 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Six4Q61321 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Six4Q61321 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Six4Q61321 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Six4Q61321 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Six4Q61321 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Six4Q61321 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Six4Q61321 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Six4Q61321 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Six4Q61321 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Gm16274-201ENSMUST00000139251 592 ntBASIC3.18□□□□□ -1.9
Six4Q61321 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Six4Q61321 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.18□□□□□ -1.9
Six4Q61321 Gm20672-201ENSMUST00000176605 261 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.18□□□□□ -1.9
Six4Q61321 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.18□□□□□ -1.9
Six4Q61321 Gm29104-201ENSMUST00000186304 222 ntBASIC3.18□□□□□ -1.9
Six4Q61321 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.18□□□□□ -1.9
Six4Q61321 Gm32340-201ENSMUST00000192883 259 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Gm8242-202ENSMUST00000193056 475 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Gm8023-201ENSMUST00000195298 903 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Six4Q61321 Gm43198-201ENSMUST00000200927 326 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Gm19126-201ENSMUST00000207896 509 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
Six4Q61321 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.18□□□□□ -1.9
Six4Q61321 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.18□□□□□ -1.9
Six4Q61321 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.18□□□□□ -1.9
Six4Q61321 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Gm9845-201ENSMUST00000056409 598 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Six4Q61321 Gm26129-201ENSMUST00000082719 107 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Six4Q61321 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Six4Q61321 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.18□□□□□ -1.9
Six4Q61321 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.18□□□□□ -1.9
Six4Q61321 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Six4Q61321 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Six4Q61321 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Six4Q61321 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
Six4Q61321 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Six4Q61321 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.17□□□□□ -1.9
Six4Q61321 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms