Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm23455-201ENSMUST00000083331 100 ntBASIC6.05□□□□□ -1.44
Scnn1aQ61180 Mir199a-2-201ENSMUST00000093618 110 ntBASIC6.05□□□□□ -1.44
Scnn1aQ61180 Gm25207-201ENSMUST00000093745 107 ntBASIC6.05□□□□□ -1.44
Scnn1aQ61180 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Scnn1aQ61180 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Scnn1aQ61180 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Scnn1aQ61180 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.05□□□□□ -1.44
Scnn1aQ61180 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Scnn1aQ61180 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Scnn1aQ61180 AC153969.1-201ENSMUST00000214047 2605 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm20667-201ENSMUST00000175674 1930 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm15670-201ENSMUST00000117740 447 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm14652-201ENSMUST00000118479 235 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm12156-201ENSMUST00000119188 554 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm14732-201ENSMUST00000121372 545 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm23120-201ENSMUST00000157654 287 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm18602-201ENSMUST00000209794 851 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scnn1aQ61180 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Smc5-206ENSMUST00000226111 3265 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Scnn1aQ61180 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm15088-201ENSMUST00000117973 1508 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm15098-201ENSMUST00000119036 1508 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Scnn1aQ61180 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.04□□□□□ -1.44
Scnn1aQ61180 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Gm43882-201ENSMUST00000204871 2264 ntBASIC6.03□□□□□ -1.44
Scnn1aQ61180 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Gm3267-201ENSMUST00000118671 473 ntBASIC6.03□□□□□ -1.44
Scnn1aQ61180 Gm16125-201ENSMUST00000159003 339 ntBASIC6.03□□□□□ -1.44
Scnn1aQ61180 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Gm27551-201ENSMUST00000184258 77 ntBASIC6.03□□□□□ -1.44
Scnn1aQ61180 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Gm29352-201ENSMUST00000188054 544 ntBASIC6.03□□□□□ -1.44
Scnn1aQ61180 Gm9134-201ENSMUST00000193186 551 ntBASIC6.03□□□□□ -1.44
Scnn1aQ61180 Gm10048-201ENSMUST00000194196 372 ntBASIC6.03□□□□□ -1.44
Scnn1aQ61180 Gm44157-201ENSMUST00000204720 410 ntBASIC6.03□□□□□ -1.44
Scnn1aQ61180 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC6.03□□□□□ -1.44
Scnn1aQ61180 AC130536.1-201ENSMUST00000224425 271 ntBASIC6.03□□□□□ -1.44
Scnn1aQ61180 Snord15b-201ENSMUST00000083032 145 ntBASIC6.03□□□□□ -1.44
Scnn1aQ61180 Mir452-201ENSMUST00000093629 85 ntBASIC6.03□□□□□ -1.44
Scnn1aQ61180 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Scnn1aQ61180 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
Scnn1aQ61180 AC133079.1-201ENSMUST00000220943 1881 ntBASIC6.02□□□□□ -1.44
Scnn1aQ61180 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
Scnn1aQ61180 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.02□□□□□ -1.45
Scnn1aQ61180 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Scnn1aQ61180 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Scnn1aQ61180 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Scnn1aQ61180 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Scnn1aQ61180 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Scnn1aQ61180 Gm43831-201ENSMUST00000200461 2598 ntBASIC6.02□□□□□ -1.45
Scnn1aQ61180 Gm37890-201ENSMUST00000195610 3992 ntBASIC6.02□□□□□ -1.45
Scnn1aQ61180 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Scnn1aQ61180 Gm24578-201ENSMUST00000103970 129 ntBASIC6.02□□□□□ -1.45
Scnn1aQ61180 Gm14890-201ENSMUST00000117660 676 ntBASIC6.02□□□□□ -1.45
Scnn1aQ61180 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC6.02□□□□□ -1.45
Scnn1aQ61180 Gm11490-201ENSMUST00000118128 272 ntBASIC6.02□□□□□ -1.45
Scnn1aQ61180 Gm12785-201ENSMUST00000122052 172 ntBASIC6.02□□□□□ -1.45
Scnn1aQ61180 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC6.02□□□□□ -1.45
Scnn1aQ61180 Gm8214-201ENSMUST00000172123 351 ntBASIC6.02□□□□□ -1.45
Scnn1aQ61180 Gm27747-201ENSMUST00000184707 85 ntBASIC6.02□□□□□ -1.45
Scnn1aQ61180 Gm28468-201ENSMUST00000188536 615 ntBASIC6.02□□□□□ -1.45
Scnn1aQ61180 Gm9317-201ENSMUST00000197055 862 ntBASIC6.02□□□□□ -1.45
Scnn1aQ61180 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms