Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm14881-201ENSMUST00000120366 372 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm15387-201ENSMUST00000120421 648 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm12607-201ENSMUST00000120724 493 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm12770-201ENSMUST00000121734 462 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm12045-201ENSMUST00000122122 573 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm22986-201ENSMUST00000122753 130 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm7855-201ENSMUST00000137737 687 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm3111-201ENSMUST00000167426 490 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm28847-201ENSMUST00000186778 700 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm37727-201ENSMUST00000191637 819 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm37433-201ENSMUST00000192695 678 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm37164-201ENSMUST00000192809 637 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm37550-201ENSMUST00000193230 463 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm37441-201ENSMUST00000194430 678 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm42164-201ENSMUST00000198881 379 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm44583-201ENSMUST00000207478 281 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm46146-201ENSMUST00000217483 346 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm17829-201ENSMUST00000219782 344 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Mir215-201ENSMUST00000083628 112 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm5518-201ENSMUST00000084171 648 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm42680-201ENSMUST00000196238 2500 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.39□□□□□ -1.87
Ssbp4Q3U4B1 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm4736-201ENSMUST00000100870 380 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm24544-201ENSMUST00000103862 110 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm14677-201ENSMUST00000117866 486 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm23365-201ENSMUST00000175019 125 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm25960-201ENSMUST00000175110 125 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm44453-201ENSMUST00000175161 126 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm25195-201ENSMUST00000177656 126 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm10067-201ENSMUST00000179462 348 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm23379-201ENSMUST00000180026 107 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm27254-201ENSMUST00000183926 517 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm27538-201ENSMUST00000185065 294 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm19503-201ENSMUST00000187109 241 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm9775-201ENSMUST00000189402 331 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm37791-201ENSMUST00000195081 286 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm43556-201ENSMUST00000196186 681 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm2314-201ENSMUST00000200391 586 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm42850-201ENSMUST00000202094 201 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm19908-201ENSMUST00000204684 391 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm45796-201ENSMUST00000212483 114 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.38□□□□□ -1.87
Ssbp4Q3U4B1 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.37□□□□□ -1.87
Ssbp4Q3U4B1 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ssbp4Q3U4B1 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.37□□□□□ -1.87
Ssbp4Q3U4B1 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ssbp4Q3U4B1 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.37□□□□□ -1.87
Ssbp4Q3U4B1 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.37□□□□□ -1.87
Ssbp4Q3U4B1 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ssbp4Q3U4B1 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ssbp4Q3U4B1 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms