Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a1Q04857 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.42□□□□□ -1.54
Col6a1Q04857 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Col6a1Q04857 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a1Q04857 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a1Q04857 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm23744-201ENSMUST00000104231 149 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm12149-201ENSMUST00000117511 654 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm13677-201ENSMUST00000120739 595 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm12872-201ENSMUST00000121835 320 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm8207-201ENSMUST00000171204 502 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm22911-201ENSMUST00000177920 107 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm27028-201ENSMUST00000182303 399 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm27402-201ENSMUST00000183890 120 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm27414-201ENSMUST00000185033 381 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm8296-201ENSMUST00000185597 524 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm37757-201ENSMUST00000193072 210 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm38053-201ENSMUST00000193938 160 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm44650-201ENSMUST00000206929 194 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm45508-201ENSMUST00000209298 299 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm45438-201ENSMUST00000210242 564 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a1Q04857 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 AC125531.1-201ENSMUST00000219849 221 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a1Q04857 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm25260-201ENSMUST00000083053 134 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm25126-201ENSMUST00000083343 102 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm25579-201ENSMUST00000083407 106 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a1Q04857 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a1Q04857 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.41□□□□□ -1.54
Col6a1Q04857 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a1Q04857 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a1Q04857 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col6a1Q04857 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a1Q04857 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a1Q04857 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col6a1Q04857 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a1Q04857 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a1Q04857 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm14355-201ENSMUST00000117352 264 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm7312-201ENSMUST00000118798 469 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm12739-201ENSMUST00000119769 382 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm14333-201ENSMUST00000130484 264 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm22804-201ENSMUST00000158052 101 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm22211-201ENSMUST00000158097 156 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a1Q04857 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm27385-201ENSMUST00000184747 104 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm28785-201ENSMUST00000187478 379 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm42832-201ENSMUST00000196361 745 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm19131-201ENSMUST00000203408 789 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm45105-201ENSMUST00000207824 397 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Gm44853-201ENSMUST00000209070 250 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Mir19a-201ENSMUST00000083482 82 ntBASIC5.4□□□□□ -1.54
Col6a1Q04857 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col6a1Q04857 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.4□□□□□ -1.55
Col6a1Q04857 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.55
Col6a1Q04857 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col6a1Q04857 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a1Q04857 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a1Q04857 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.4□□□□□ -1.55
Col6a1Q04857 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
Col6a1Q04857 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.4□□□□□ -1.55
Col6a1Q04857 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
Col6a1Q04857 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a1Q04857 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a1Q04857 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms