Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Snord38a-201ENSMUST00000083746 71 ntBASIC4.88□□□□□ -1.63
Usp4P35123 Gm3867-201ENSMUST00000086108 279 ntBASIC4.88□□□□□ -1.63
Usp4P35123 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.88□□□□□ -1.63
Usp4P35123 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Usp4P35123 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Usp4P35123 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Usp4P35123 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Usp4P35123 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Usp4P35123 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Usp4P35123 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Usp4P35123 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Usp4P35123 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Usp4P35123 Gm12261-201ENSMUST00000117499 645 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.87□□□□□ -1.63
Usp4P35123 Gm3362-201ENSMUST00000148102 466 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Usp4P35123 Gm22084-201ENSMUST00000157585 105 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm23496-201ENSMUST00000157741 248 ntBASIC4.87□□□□□ -1.63
Usp4P35123 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Usp4P35123 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.87□□□□□ -1.63
Usp4P35123 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm25314-201ENSMUST00000178810 79 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Mir6418-201ENSMUST00000185075 115 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm28785-201ENSMUST00000187478 379 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Usp4P35123 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Usp4P35123 Gm29332-201ENSMUST00000190829 227 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm43214-201ENSMUST00000199242 352 ntBASIC4.87□□□□□ -1.63
Usp4P35123 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.87□□□□□ -1.63
Usp4P35123 Gm18488-201ENSMUST00000215082 364 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm8158-201ENSMUST00000219220 465 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm2436-201ENSMUST00000219562 774 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm8112-201ENSMUST00000219637 465 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm18120-201ENSMUST00000220079 511 ntBASIC4.87□□□□□ -1.63
Usp4P35123 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.87□□□□□ -1.63
Usp4P35123 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.87□□□□□ -1.63
Usp4P35123 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Gm5215-201ENSMUST00000054380 405 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Usp4P35123 Mir19a-201ENSMUST00000083482 82 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Mir181a-2-201ENSMUST00000083489 76 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Usp4P35123 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.87□□□□□ -1.63
Usp4P35123 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Usp4P35123 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Usp4P35123 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Usp4P35123 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Usp4P35123 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Usp4P35123 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.86□□□□□ -1.63
Usp4P35123 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp4P35123 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.86□□□□□ -1.63
Usp4P35123 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp4P35123 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Usp4P35123 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp4P35123 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp4P35123 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm24469-201ENSMUST00000104487 131 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm13250-201ENSMUST00000117209 753 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm14706-201ENSMUST00000117744 255 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm14594-201ENSMUST00000118052 537 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm14590-201ENSMUST00000118934 537 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm11830-201ENSMUST00000120175 561 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm11448-201ENSMUST00000120427 450 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm16114-201ENSMUST00000161930 300 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm22859-201ENSMUST00000174978 122 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm14596-201ENSMUST00000180268 537 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm14595-201ENSMUST00000180335 537 ntBASIC4.86□□□□□ -1.63
Usp4P35123 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Usp4P35123 Gm33354-201ENSMUST00000195448 906 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
Usp4P35123 Gm44648-201ENSMUST00000208267 329 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gm6929-201ENSMUST00000210930 468 ntBASIC4.86□□□□□ -1.63
Usp4P35123 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp4P35123 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.86□□□□□ -1.63
Usp4P35123 AC115289.1-201ENSMUST00000224915 522 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp4P35123 Gm22826-201ENSMUST00000083774 165 ntBASIC4.86□□□□□ -1.63
Usp4P35123 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp4P35123 Mir504-201ENSMUST00000093602 79 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Usp4P35123 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Usp4P35123 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp4P35123 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.86□□□□□ -1.63
Usp4P35123 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
Usp4P35123 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp4P35123 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Usp4P35123 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Usp4P35123 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Usp4P35123 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.85□□□□□ -1.63
Usp4P35123 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms