Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm14578-201ENSMUST00000122166 391 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm8061-201ENSMUST00000122380 350 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm23169-201ENSMUST00000157157 112 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm24295-201ENSMUST00000158298 131 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm24464-201ENSMUST00000179697 107 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm22633-201ENSMUST00000179834 107 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm21991-201ENSMUST00000180006 508 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm27541-201ENSMUST00000184078 122 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm9134-201ENSMUST00000193186 551 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm9332-201ENSMUST00000198431 730 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm43405-201ENSMUST00000198642 337 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm32536-201ENSMUST00000205209 445 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm23406-201ENSMUST00000082537 122 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm26163-201ENSMUST00000083792 178 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.46□□□□□ -1.7
Pcdh1F7BJK1 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm12285-201ENSMUST00000117347 233 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm5757-201ENSMUST00000117494 528 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm13510-201ENSMUST00000118659 429 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm12852-201ENSMUST00000119478 719 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm15803-201ENSMUST00000120118 394 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm15267-201ENSMUST00000120888 464 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm11805-201ENSMUST00000121238 600 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm24060-201ENSMUST00000157494 95 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm23411-201ENSMUST00000157988 62 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm3531-201ENSMUST00000162698 489 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm4222-201ENSMUST00000165784 470 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm23660-201ENSMUST00000178362 79 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm24088-201ENSMUST00000179100 79 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm8939-201ENSMUST00000192577 964 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm37882-201ENSMUST00000195254 196 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm42542-201ENSMUST00000197978 268 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm42459-201ENSMUST00000199679 742 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm43039-201ENSMUST00000202883 963 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm6012-201ENSMUST00000210821 730 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm18409-202ENSMUST00000220105 529 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 AC125311.1-201ENSMUST00000226950 220 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 AC170600.1-201ENSMUST00000228763 277 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm23455-201ENSMUST00000083331 100 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.45□□□□□ -1.7
Pcdh1F7BJK1 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm24789-201ENSMUST00000104282 131 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm15357-201ENSMUST00000119160 285 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm11584-201ENSMUST00000120636 325 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms