Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Gm29658-201ENSMUST00000185404 230 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Gm29597-201ENSMUST00000188035 308 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Gm28069-201ENSMUST00000189926 214 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Gm42438-201ENSMUST00000197832 974 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Gm5551-201ENSMUST00000199720 690 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Gm44919-201ENSMUST00000208587 1073 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Gm20039-201ENSMUST00000210329 394 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Gm45574-201ENSMUST00000210921 331 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Olfr936-202ENSMUST00000216912 937 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 CT030705.1-201ENSMUST00000223971 533 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 CT030254.3-201ENSMUST00000225959 1231 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Gm23847-201ENSMUST00000083829 110 ntBASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trav6-6A0A075B603 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm11488-201ENSMUST00000117277 863 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm14469-201ENSMUST00000118363 202 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm14982-201ENSMUST00000121102 442 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm12276-201ENSMUST00000121709 301 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm22722-201ENSMUST00000157467 132 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm24745-201ENSMUST00000157840 85 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm22833-201ENSMUST00000158292 132 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm27025-201ENSMUST00000182392 942 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm1833-201ENSMUST00000191608 682 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm19244-201ENSMUST00000204340 253 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm43954-201ENSMUST00000204634 544 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm45588-201ENSMUST00000211213 630 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm2059-201ENSMUST00000212025 287 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 AC091783.5-201ENSMUST00000224928 671 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 AC140393.2-201ENSMUST00000226894 943 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Snora7a-201ENSMUST00000082629 140 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.24□□□□□ -2.05
Trav6-6A0A075B603 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm26254-201ENSMUST00000122491 118 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm26477-201ENSMUST00000122617 323 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm23326-201ENSMUST00000157419 105 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm22380-201ENSMUST00000157479 95 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm25432-201ENSMUST00000158284 66 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm25835-201ENSMUST00000158917 144 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm29105-201ENSMUST00000187256 450 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm28191-201ENSMUST00000189112 211 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm37219-201ENSMUST00000192036 926 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm43308-201ENSMUST00000197236 373 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm29815-201ENSMUST00000202418 178 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm45420-201ENSMUST00000211243 425 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 AC130547.1-201ENSMUST00000228079 1047 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Mir101b-201ENSMUST00000083622 97 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm25005-201ENSMUST00000083812 156 ntBASIC2.23□□□□□ -2.05
Trav6-6A0A075B603 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms