Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm23867-201ENSMUST00000122649 274 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Gm26348-201ENSMUST00000157528 240 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Gm24224-201ENSMUST00000158828 258 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Gm24757-201ENSMUST00000176987 371 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Spin2g-201ENSMUST00000178425 687 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Gm23144-201ENSMUST00000180226 107 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Gm28552-201ENSMUST00000190725 388 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Gm28098-201ENSMUST00000191361 699 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 AC147633.1-201ENSMUST00000225134 259 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 AC160756.1-201ENSMUST00000227266 235 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Gm26056-201ENSMUST00000083043 104 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Upf1Q9EPU0 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Upf1Q9EPU0 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Upf1Q9EPU0 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm28634-201ENSMUST00000191087 2613 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm14469-201ENSMUST00000118363 202 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm23124-201ENSMUST00000157650 107 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm17183-201ENSMUST00000171170 493 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm20526-201ENSMUST00000173416 158 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm25397-201ENSMUST00000176951 92 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm24418-201ENSMUST00000177597 79 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm24639-201ENSMUST00000178518 79 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm23076-201ENSMUST00000179082 79 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm25077-201ENSMUST00000179157 79 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Mir7578-201ENSMUST00000183455 82 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm27818-201ENSMUST00000184536 159 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm18964-201ENSMUST00000193013 563 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm42758-201ENSMUST00000202146 283 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 AC174082.1-201ENSMUST00000221106 307 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm7099-201ENSMUST00000080066 554 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm6065-201ENSMUST00000081336 492 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm4017-201ENSMUST00000084813 338 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm6043-201ENSMUST00000099961 492 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.41□□□□□ -1.54
Upf1Q9EPU0 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm24835-201ENSMUST00000116777 111 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm14086-201ENSMUST00000117152 173 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm12982-201ENSMUST00000117408 190 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm11673-201ENSMUST00000117846 331 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm15195-201ENSMUST00000118775 263 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm16106-201ENSMUST00000119187 294 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm14804-201ENSMUST00000122322 508 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm23499-201ENSMUST00000157736 268 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm22804-201ENSMUST00000158052 101 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm24739-201ENSMUST00000158855 292 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm22243-201ENSMUST00000178754 120 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm18828-202ENSMUST00000181035 310 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Mir6917-201ENSMUST00000184111 61 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Mir6905-201ENSMUST00000184228 70 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm27249-201ENSMUST00000185049 328 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm29134-201ENSMUST00000186579 126 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm28241-201ENSMUST00000190916 235 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm45105-201ENSMUST00000207824 397 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Upf1Q9EPU0 AC131029.2-202ENSMUST00000228430 496 ntBASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Upf1Q9EPU0 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms