Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm22245-201ENSMUST00000082479 103 ntBASIC4.79□□□□□ -1.64
Ccdc9Q8VC31 Gm25147-201ENSMUST00000083030 105 ntBASIC4.79□□□□□ -1.64
Ccdc9Q8VC31 Mir465-201ENSMUST00000093563 74 ntBASIC4.79□□□□□ -1.64
Ccdc9Q8VC31 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc9Q8VC31 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.79□□□□□ -1.64
Ccdc9Q8VC31 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Ccdc9Q8VC31 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.79□□□□□ -1.64
Ccdc9Q8VC31 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc9Q8VC31 Gm14404-201ENSMUST00000119117 1660 ntBASIC4.79□□□□□ -1.64
Ccdc9Q8VC31 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm23948-201ENSMUST00000104030 132 ntBASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm12044-201ENSMUST00000120335 213 ntBASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm3160-201ENSMUST00000128343 607 ntBASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm22080-201ENSMUST00000157591 106 ntBASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm17030-201ENSMUST00000167016 393 ntBASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm44583-201ENSMUST00000207478 281 ntBASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm8785-201ENSMUST00000220259 487 ntBASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.78□□□□□ -1.64
Ccdc9Q8VC31 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm23608-201ENSMUST00000104545 128 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm7974-201ENSMUST00000117154 408 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm13614-201ENSMUST00000117306 503 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm14163-201ENSMUST00000117342 217 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm13064-201ENSMUST00000119125 557 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm13471-201ENSMUST00000122057 433 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm23123-201ENSMUST00000157648 144 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm24727-201ENSMUST00000158231 144 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm3221-201ENSMUST00000164869 440 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm17085-201ENSMUST00000165425 502 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm22392-201ENSMUST00000177971 107 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm26950-201ENSMUST00000182734 498 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm37828-201ENSMUST00000192496 432 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm8132-201ENSMUST00000204938 640 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm44002-201ENSMUST00000205134 594 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm5322-201ENSMUST00000206142 699 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm34783-201ENSMUST00000209159 303 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm45312-201ENSMUST00000210566 311 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 AC164117.2-201ENSMUST00000222090 327 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm22350-201ENSMUST00000083924 156 ntBASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ccdc9Q8VC31 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm24835-201ENSMUST00000116777 111 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm11905-201ENSMUST00000117653 678 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm15120-201ENSMUST00000120602 301 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Mir6393-201ENSMUST00000183709 94 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm27165-201ENSMUST00000183951 232 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Ighv1-41-201ENSMUST00000194414 329 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm43472-201ENSMUST00000200175 154 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm34224-201ENSMUST00000204606 364 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm4501-201ENSMUST00000207330 551 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm4528-201ENSMUST00000207905 551 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 AC159472.1-201ENSMUST00000218178 463 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm9818-201ENSMUST00000050900 255 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms