Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Ushbp1Q8R370 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.9□□□□□ -1.62
Ushbp1Q8R370 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.9□□□□□ -1.62
Ushbp1Q8R370 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Ushbp1Q8R370 Gm11698-201ENSMUST00000117948 455 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Gm11352-201ENSMUST00000119264 517 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Gm12891-201ENSMUST00000119358 240 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Gm6584-201ENSMUST00000119671 447 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Gm13557-201ENSMUST00000120771 382 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Gm14845-201ENSMUST00000121259 306 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Gm5263-201ENSMUST00000163646 601 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Gm22166-201ENSMUST00000178419 121 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Gm23288-201ENSMUST00000179213 121 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Gm5552-201ENSMUST00000197149 515 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Gm4734-201ENSMUST00000200117 777 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ushbp1Q8R370 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC4.9□□□□□ -1.63
Ushbp1Q8R370 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ushbp1Q8R370 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ushbp1Q8R370 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 AC117202.3-201ENSMUST00000228532 310 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Gm22810-201ENSMUST00000082741 158 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ushbp1Q8R370 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ushbp1Q8R370 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Mir676-201ENSMUST00000102443 89 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm3940-201ENSMUST00000105087 432 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm14358-201ENSMUST00000118458 403 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm15195-201ENSMUST00000118775 263 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm12543-201ENSMUST00000120410 543 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm25058-201ENSMUST00000157365 128 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm22501-201ENSMUST00000158981 127 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm28304-201ENSMUST00000185977 312 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm29256-201ENSMUST00000189094 312 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm28484-201ENSMUST00000190606 312 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm42830-201ENSMUST00000196642 313 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm29754-201ENSMUST00000206269 358 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm44543-201ENSMUST00000209136 396 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm46190-201ENSMUST00000219650 427 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm23510-201ENSMUST00000083083 163 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Mir215-201ENSMUST00000083628 112 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Mir323-201ENSMUST00000083683 86 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm24446-201ENSMUST00000083982 156 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.89□□□□□ -1.63
Ushbp1Q8R370 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm12492-201ENSMUST00000117665 564 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm11522-201ENSMUST00000120533 176 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm22236-201ENSMUST00000157093 106 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm22378-201ENSMUST00000157481 111 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm2389-201ENSMUST00000160487 189 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm26219-201ENSMUST00000175216 71 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm25451-201ENSMUST00000177832 121 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm21729-201ENSMUST00000180058 664 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm21853-201ENSMUST00000180071 664 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm29495-201ENSMUST00000189319 664 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm37097-201ENSMUST00000193676 336 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm38080-201ENSMUST00000194035 268 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm38041-201ENSMUST00000194445 661 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm42828-201ENSMUST00000199669 469 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm6303-201ENSMUST00000210123 471 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms