Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdhb7Q8CDY9 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Mir690-201ENSMUST00000102110 109 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Mir701-201ENSMUST00000102208 109 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm22953-201ENSMUST00000116724 101 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm11270-201ENSMUST00000117685 471 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm11600-201ENSMUST00000119592 240 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm6175-201ENSMUST00000121351 400 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm5353-201ENSMUST00000139800 793 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm25655-201ENSMUST00000158465 290 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm25486-201ENSMUST00000158726 63 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm24957-201ENSMUST00000179604 132 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Mir6346-201ENSMUST00000183982 81 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm37609-201ENSMUST00000191778 678 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm32340-201ENSMUST00000192883 259 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm44977-201ENSMUST00000205283 420 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm10709-201ENSMUST00000213318 480 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm4012-201ENSMUST00000221504 581 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Mir143-201ENSMUST00000083511 63 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Pcdhb7Q8CDY9 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm26147-201ENSMUST00000104479 114 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm23839-201ENSMUST00000116957 109 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm13329-201ENSMUST00000117063 265 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm14657-201ENSMUST00000117461 302 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm23233-201ENSMUST00000157301 137 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm23557-201ENSMUST00000157820 138 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm20526-201ENSMUST00000173416 158 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm27460-201ENSMUST00000184213 100 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm27679-201ENSMUST00000184612 84 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm19206-201ENSMUST00000186401 827 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm44319-201ENSMUST00000196974 93 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Pcdhb7Q8CDY9 BC051076-202ENSMUST00000199477 2868 ntBASIC5.53□□□□□ -1.52
Pcdhb7Q8CDY9 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Pcdhb7Q8CDY9 Gm44821-201ENSMUST00000208212 2002 ntBASIC5.53□□□□□ -1.52
Pcdhb7Q8CDY9 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Pcdhb7Q8CDY9 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Pcdhb7Q8CDY9 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.53□□□□□ -1.52
Pcdhb7Q8CDY9 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.53□□□□□ -1.52
Pcdhb7Q8CDY9 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Pcdhb7Q8CDY9 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Pcdhb7Q8CDY9 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Pcdhb7Q8CDY9 Gm22372-201ENSMUST00000104589 136 ntBASIC5.53□□□□□ -1.52
Pcdhb7Q8CDY9 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Pcdhb7Q8CDY9 Gm14694-201ENSMUST00000121856 282 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms