Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm14355-201ENSMUST00000117352 264 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm11584-201ENSMUST00000120636 325 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm15267-201ENSMUST00000120888 464 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm14775-201ENSMUST00000122089 310 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm14333-201ENSMUST00000130484 264 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm22348-201ENSMUST00000178674 79 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm27028-201ENSMUST00000182303 399 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Mir6382-201ENSMUST00000184055 110 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm28781-201ENSMUST00000185760 696 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm29307-201ENSMUST00000187367 696 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm2497-201ENSMUST00000189539 601 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm29339-201ENSMUST00000189613 696 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm28717-201ENSMUST00000189950 315 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm29407-201ENSMUST00000191468 696 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC4.3□□□□□ -1.72
Col8a1Q00780 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.3□□□□□ -1.72
Col8a1Q00780 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm7822-201ENSMUST00000222433 581 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm9318-201ENSMUST00000222444 438 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm46389-201ENSMUST00000223199 392 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 AC173482.4-201ENSMUST00000225096 348 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col8a1Q00780 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col8a1Q00780 Gm26447-201ENSMUST00000082448 129 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Mir19a-201ENSMUST00000083482 82 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 AC153494.1-201ENSMUST00000218664 3041 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col8a1Q00780 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col8a1Q00780 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.3□□□□□ -1.72
Col8a1Q00780 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col8a1Q00780 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col8a1Q00780 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col8a1Q00780 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col8a1Q00780 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.29□□□□□ -1.72
Col8a1Q00780 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm12281-201ENSMUST00000119536 298 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm9043-201ENSMUST00000119677 314 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm14656-201ENSMUST00000120342 502 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm14240-201ENSMUST00000120353 546 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm14428-201ENSMUST00000120408 822 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm11556-201ENSMUST00000120751 288 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm6956-201ENSMUST00000134724 546 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm7846-201ENSMUST00000145844 274 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm26180-201ENSMUST00000179942 107 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm28785-201ENSMUST00000187478 379 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm28468-201ENSMUST00000188536 615 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm29262-201ENSMUST00000190084 196 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm37757-201ENSMUST00000193072 210 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm10048-201ENSMUST00000194196 372 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm42828-201ENSMUST00000199669 469 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm7675-201ENSMUST00000208828 686 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC4.29□□□□□ -1.72
Col8a1Q00780 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.29□□□□□ -1.72
Col8a1Q00780 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC4.29□□□□□ -1.72
Col8a1Q00780 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 AC125311.1-201ENSMUST00000226950 220 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm23447-201ENSMUST00000082798 163 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Olfr713-201ENSMUST00000098139 975 ntBASIC4.29□□□□□ -1.72
Col8a1Q00780 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col8a1Q00780 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col8a1Q00780 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col8a1Q00780 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms