Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Hoxd9P28357 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Hoxd9P28357 n-R5s67-201ENSMUST00000104336 114 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Hoxd9P28357 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm15531-201ENSMUST00000118062 252 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm14871-201ENSMUST00000119056 194 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm14472-201ENSMUST00000119815 282 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm25430-201ENSMUST00000157614 289 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC5.11□□□□□ -1.59
Hoxd9P28357 Mir3090-201ENSMUST00000175597 87 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm23725-201ENSMUST00000177876 107 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm21827-201ENSMUST00000178247 423 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm27148-201ENSMUST00000185086 160 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm28660-201ENSMUST00000186496 253 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm6075-201ENSMUST00000186816 486 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm38150-201ENSMUST00000192996 452 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm37070-201ENSMUST00000193272 460 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Igkv13-76-201ENSMUST00000197621 347 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm22897-201ENSMUST00000197860 128 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm43554-201ENSMUST00000199987 186 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm6112-201ENSMUST00000208037 629 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 AC147633.1-201ENSMUST00000225134 259 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 AC101945.1-201ENSMUST00000226734 466 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Hoxd9P28357 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm23460-201ENSMUST00000083258 109 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd9P28357 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.11□□□□□ -1.59
Hoxd9P28357 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd9P28357 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd9P28357 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd9P28357 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.11□□□□□ -1.59
Hoxd9P28357 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Hoxd9P28357 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd9P28357 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Hoxd9P28357 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Hoxd9P28357 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Hoxd9P28357 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm23424-201ENSMUST00000103889 110 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm23750-201ENSMUST00000104222 132 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm14825-201ENSMUST00000113538 701 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm11971-201ENSMUST00000117715 288 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm11693-201ENSMUST00000119625 565 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm13537-201ENSMUST00000120467 267 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm11825-201ENSMUST00000120710 736 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm11369-201ENSMUST00000120812 318 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm12486-201ENSMUST00000120887 541 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm14910-201ENSMUST00000121037 1805 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm15428-201ENSMUST00000121352 333 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm13214-201ENSMUST00000122137 408 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm25906-201ENSMUST00000158489 126 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm6872-201ENSMUST00000165001 700 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.1□□□□□ -1.59
Hoxd9P28357 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm2325-201ENSMUST00000186637 581 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm21673-201ENSMUST00000186640 436 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm6137-201ENSMUST00000187552 578 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm5368-201ENSMUST00000189012 589 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm21135-201ENSMUST00000189023 436 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm29793-201ENSMUST00000202874 460 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm45002-201ENSMUST00000208045 120 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm45252-201ENSMUST00000211579 397 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hoxd9P28357 AC130829.3-201ENSMUST00000222735 154 ntBASIC5.1□□□□□ -1.59
Hoxd9P28357 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hoxd9P28357 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxd9P28357 Gm10038-201ENSMUST00000077233 441 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms