Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm15530-201ENSMUST00000122206 555 ntBASIC2.74□□□□□ -1.97
Col5a1O88207 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col5a1O88207 Gm22651-201ENSMUST00000157872 94 ntBASIC2.74□□□□□ -1.97
Col5a1O88207 Gm6374-201ENSMUST00000159051 788 ntBASIC2.74□□□□□ -1.97
Col5a1O88207 Gm17063-201ENSMUST00000168135 456 ntBASIC2.74□□□□□ -1.97
Col5a1O88207 Gm9587-201ENSMUST00000172449 454 ntBASIC2.74□□□□□ -1.97
Col5a1O88207 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC2.74□□□□□ -1.97
Col5a1O88207 Gm18843-201ENSMUST00000194982 719 ntBASIC2.74□□□□□ -1.97
Col5a1O88207 Gm36985-201ENSMUST00000195595 379 ntBASIC2.74□□□□□ -1.97
Col5a1O88207 Gm43992-201ENSMUST00000204358 197 ntBASIC2.74□□□□□ -1.97
Col5a1O88207 AC122924.1-201ENSMUST00000222044 163 ntBASIC2.74□□□□□ -1.97
Col5a1O88207 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col5a1O88207 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col5a1O88207 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Col5a1O88207 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Col5a1O88207 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col5a1O88207 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Col5a1O88207 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
Col5a1O88207 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col5a1O88207 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col5a1O88207 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Col5a1O88207 Gm14333-201ENSMUST00000130484 264 ntBASIC2.73□□□□□ -1.97
Col5a1O88207 Gm25153-201ENSMUST00000157118 156 ntBASIC2.73□□□□□ -1.97
Col5a1O88207 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC2.73□□□□□ -1.97
Col5a1O88207 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col5a1O88207 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC2.73□□□□□ -1.97
Col5a1O88207 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Col5a1O88207 Gm29602-201ENSMUST00000186887 442 ntBASIC2.73□□□□□ -1.97
Col5a1O88207 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.73□□□□□ -1.97
Col5a1O88207 Gm2979-201ENSMUST00000193442 463 ntBASIC2.73□□□□□ -1.97
Col5a1O88207 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.73□□□□□ -1.97
Col5a1O88207 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.73□□□□□ -1.97
Col5a1O88207 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.73□□□□□ -1.97
Col5a1O88207 Gm44844-201ENSMUST00000207242 336 ntBASIC2.73□□□□□ -1.97
Col5a1O88207 Gm45710-201ENSMUST00000212847 215 ntBASIC2.73□□□□□ -1.97
Col5a1O88207 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Col5a1O88207 LOC667541-201ENSMUST00000223408 278 ntBASIC2.73□□□□□ -1.97
Col5a1O88207 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.73□□□□□ -1.97
Col5a1O88207 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col5a1O88207 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Col5a1O88207 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col5a1O88207 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC2.73□□□□□ -1.97
Col5a1O88207 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Col5a1O88207 Gm14768-201ENSMUST00000122126 678 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC2.72□□□□□ -1.97
Col5a1O88207 Gm20612-201ENSMUST00000176318 236 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm25528-201ENSMUST00000180264 132 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm45452-201ENSMUST00000210905 177 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm17872-201ENSMUST00000222550 532 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Col5a1O88207 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Col5a1O88207 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Col5a1O88207 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Col5a1O88207 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Col5a1O88207 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Col5a1O88207 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Col5a1O88207 Gm43834-201ENSMUST00000197097 4830 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col5a1O88207 Gm11905-201ENSMUST00000117653 678 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm12723-201ENSMUST00000120700 451 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm24922-201ENSMUST00000158511 102 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC2.72□□□□□ -1.97
Col5a1O88207 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Col5a1O88207 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Col5a1O88207 Gm22254-201ENSMUST00000179186 110 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC2.72□□□□□ -1.97
Col5a1O88207 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm37433-201ENSMUST00000192695 678 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm37441-201ENSMUST00000194430 678 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.72□□□□□ -1.97
Col5a1O88207 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm45814-201ENSMUST00000212646 775 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Col5a1O88207 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
Col5a1O88207 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col5a1O88207 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.72□□□□□ -1.97
Col5a1O88207 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Col5a1O88207 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col5a1O88207 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col5a1O88207 Gm44078-201ENSMUST00000204652 2646 ntBASIC2.71□□□□□ -1.98
Col5a1O88207 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Col5a1O88207 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Col5a1O88207 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC2.71□□□□□ -1.98
Col5a1O88207 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC2.71□□□□□ -1.98
Col5a1O88207 Gm22961-201ENSMUST00000157964 106 ntBASIC2.71□□□□□ -1.98
Col5a1O88207 Gm25863-201ENSMUST00000158249 329 ntBASIC2.71□□□□□ -1.98
Col5a1O88207 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Col5a1O88207 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.71□□□□□ -1.98
Col5a1O88207 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC2.71□□□□□ -1.98
Col5a1O88207 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.71□□□□□ -1.98
Col5a1O88207 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.71□□□□□ -1.98
Col5a1O88207 Olfr844-201ENSMUST00000054106 930 ntBASIC2.71□□□□□ -1.98
Col5a1O88207 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Col5a1O88207 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Col5a1O88207 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC2.71□□□□□ -1.98
Col5a1O88207 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms