Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm37866-201ENSMUST00000191950 696 ntBASIC2.35□□□□□ -2.03
SncaO55042 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.35□□□□□ -2.03
SncaO55042 Gm43039-201ENSMUST00000202883 963 ntBASIC2.35□□□□□ -2.03
SncaO55042 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.35□□□□□ -2.03
SncaO55042 Gm36776-201ENSMUST00000207006 203 ntBASIC2.35□□□□□ -2.03
SncaO55042 Gm45588-201ENSMUST00000211213 630 ntBASIC2.35□□□□□ -2.03
SncaO55042 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SncaO55042 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.35□□□□□ -2.03
SncaO55042 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SncaO55042 Gm25592-201ENSMUST00000082635 131 ntBASIC2.35□□□□□ -2.03
SncaO55042 Mir27a-201ENSMUST00000083510 87 ntBASIC2.35□□□□□ -2.03
SncaO55042 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SncaO55042 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SncaO55042 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.35□□□□□ -2.03
SncaO55042 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SncaO55042 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SncaO55042 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SncaO55042 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SncaO55042 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SncaO55042 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.34□□□□□ -2.03
SncaO55042 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.34□□□□□ -2.03
SncaO55042 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SncaO55042 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SncaO55042 Gm12492-201ENSMUST00000117665 564 ntBASIC2.34□□□□□ -2.03
SncaO55042 Gm16445-201ENSMUST00000120399 714 ntBASIC2.34□□□□□ -2.03
SncaO55042 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.34□□□□□ -2.03
SncaO55042 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.34□□□□□ -2.03
SncaO55042 Gm22330-201ENSMUST00000158068 115 ntBASIC2.34□□□□□ -2.03
SncaO55042 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SncaO55042 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC2.34□□□□□ -2.03
SncaO55042 Gm27783-201ENSMUST00000183534 105 ntBASIC2.34□□□□□ -2.03
SncaO55042 Gm7870-201ENSMUST00000184467 616 ntBASIC2.34□□□□□ -2.03
SncaO55042 Gm29259-201ENSMUST00000186396 694 ntBASIC2.34□□□□□ -2.03
SncaO55042 Gm29597-201ENSMUST00000188035 308 ntBASIC2.34□□□□□ -2.03
SncaO55042 Gm19030-201ENSMUST00000194947 552 ntBASIC2.34□□□□□ -2.03
SncaO55042 Gm44118-201ENSMUST00000204665 229 ntBASIC2.34□□□□□ -2.03
SncaO55042 Gm8681-201ENSMUST00000219115 618 ntBASIC2.34□□□□□ -2.03
SncaO55042 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SncaO55042 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.34□□□□□ -2.03
SncaO55042 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SncaO55042 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SncaO55042 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
SncaO55042 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SncaO55042 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.34□□□□□ -2.04
SncaO55042 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
SncaO55042 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
SncaO55042 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SncaO55042 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.33□□□□□ -2.04
SncaO55042 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SncaO55042 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SncaO55042 Gm22590-201ENSMUST00000104247 128 ntBASIC2.33□□□□□ -2.04
SncaO55042 Gm14981-201ENSMUST00000117325 943 ntBASIC2.33□□□□□ -2.04
SncaO55042 Gm11866-201ENSMUST00000120209 335 ntBASIC2.33□□□□□ -2.04
SncaO55042 Gm14162-201ENSMUST00000121985 601 ntBASIC2.33□□□□□ -2.04
SncaO55042 Gm22026-201ENSMUST00000122735 281 ntBASIC2.33□□□□□ -2.04
SncaO55042 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.33□□□□□ -2.04
SncaO55042 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SncaO55042 Gm26045-201ENSMUST00000157862 97 ntBASIC2.33□□□□□ -2.04
SncaO55042 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.33□□□□□ -2.04
SncaO55042 Snord53-201ENSMUST00000175146 78 ntBASIC2.33□□□□□ -2.04
SncaO55042 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC2.33□□□□□ -2.04
SncaO55042 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.33□□□□□ -2.04
SncaO55042 Gm37431-201ENSMUST00000195102 111 ntBASIC2.33□□□□□ -2.04
SncaO55042 Gm18384-201ENSMUST00000195974 808 ntBASIC2.33□□□□□ -2.04
SncaO55042 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.33□□□□□ -2.04
SncaO55042 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SncaO55042 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC2.33□□□□□ -2.04
SncaO55042 Gm44964-201ENSMUST00000207011 273 ntBASIC2.33□□□□□ -2.04
SncaO55042 Gm44824-201ENSMUST00000207021 229 ntBASIC2.33□□□□□ -2.04
SncaO55042 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC2.33□□□□□ -2.04
SncaO55042 Gm18487-201ENSMUST00000215826 878 ntBASIC2.33□□□□□ -2.04
SncaO55042 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.33□□□□□ -2.04
SncaO55042 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.33□□□□□ -2.04
SncaO55042 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.33□□□□□ -2.04
SncaO55042 Gm23847-201ENSMUST00000083829 110 ntBASIC2.33□□□□□ -2.04
SncaO55042 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
SncaO55042 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.33□□□□□ -2.04
SncaO55042 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SncaO55042 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SncaO55042 Mir294-201ENSMUST00000104710 84 ntBASIC2.32□□□□□ -2.04
SncaO55042 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.32□□□□□ -2.04
SncaO55042 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.32□□□□□ -2.04
SncaO55042 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.32□□□□□ -2.04
SncaO55042 Gm14982-201ENSMUST00000121102 442 ntBASIC2.32□□□□□ -2.04
SncaO55042 Gm11229-201ENSMUST00000121993 437 ntBASIC2.32□□□□□ -2.04
SncaO55042 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.32□□□□□ -2.04
SncaO55042 Gm23667-201ENSMUST00000157466 120 ntBASIC2.32□□□□□ -2.04
SncaO55042 Gm26352-201ENSMUST00000158223 125 ntBASIC2.32□□□□□ -2.04
SncaO55042 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SncaO55042 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.32□□□□□ -2.04
SncaO55042 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SncaO55042 Gm27330-201ENSMUST00000184689 132 ntBASIC2.32□□□□□ -2.04
SncaO55042 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC2.32□□□□□ -2.04
SncaO55042 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.32□□□□□ -2.04
SncaO55042 Gm19620-201ENSMUST00000195972 434 ntBASIC2.32□□□□□ -2.04
SncaO55042 Gm43521-201ENSMUST00000197838 255 ntBASIC2.32□□□□□ -2.04
SncaO55042 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.32□□□□□ -2.04
SncaO55042 Gm43107-201ENSMUST00000198729 255 ntBASIC2.32□□□□□ -2.04
SncaO55042 Gm43384-201ENSMUST00000200569 637 ntBASIC2.32□□□□□ -2.04
SncaO55042 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms