Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Gm15074-201ENSMUST00000117603 936 ntBASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Gm12513-201ENSMUST00000118617 352 ntBASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Trbv22-201ENSMUST00000191697 291 ntBASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Gm43658-201ENSMUST00000202348 4176 ntBASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 AC162376.1-201ENSMUST00000220120 435 ntBASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Col6a3E9PWQ3 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
Col6a3E9PWQ3 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Col6a3E9PWQ3 Mir3968-201ENSMUST00000175355 100 ntBASIC2.78□□□□□ -1.97
Col6a3E9PWQ3 Gm18330-201ENSMUST00000199246 547 ntBASIC2.78□□□□□ -1.97
Col6a3E9PWQ3 Gm42828-201ENSMUST00000199669 469 ntBASIC2.78□□□□□ -1.97
Col6a3E9PWQ3 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.78□□□□□ -1.97
Col6a3E9PWQ3 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.78□□□□□ -1.97
Col6a3E9PWQ3 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Gm15421-202ENSMUST00000118224 399 ntBASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Gm14570-201ENSMUST00000119444 391 ntBASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Mir5127-201ENSMUST00000175295 71 ntBASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Gm28637-201ENSMUST00000179424 345 ntBASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Gm44849-201ENSMUST00000207595 484 ntBASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Mir6715-201ENSMUST00000184990 57 ntBASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Gm43491-201ENSMUST00000197133 784 ntBASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Gm19177-201ENSMUST00000204520 613 ntBASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col6a3E9PWQ3 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Gm24720-201ENSMUST00000157518 166 ntBASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Gm43717-201ENSMUST00000198684 310 ntBASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Gm11943-201ENSMUST00000119473 327 ntBASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Ang-ps3-201ENSMUST00000177964 433 ntBASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Gm29524-201ENSMUST00000190819 699 ntBASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.76□□□□□ -1.97
Col6a3E9PWQ3 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm22469-201ENSMUST00000104118 133 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm15159-201ENSMUST00000117062 764 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm45498-201ENSMUST00000210346 283 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 AC154618.1-201ENSMUST00000227451 303 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 AC192333.5-201ENSMUST00000224620 2350 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm14912-201ENSMUST00000120166 1773 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm16017-201ENSMUST00000119834 208 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm22361-201ENSMUST00000158435 176 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm25836-201ENSMUST00000158918 123 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm22192-201ENSMUST00000175128 85 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm28623-201ENSMUST00000187219 192 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm25632-201ENSMUST00000083112 85 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col6a3E9PWQ3 Gm23231-201ENSMUST00000157299 104 ntBASIC2.74□□□□□ -1.97
Col6a3E9PWQ3 Gm43478-201ENSMUST00000200381 292 ntBASIC2.74□□□□□ -1.97
Col6a3E9PWQ3 Gm20304-201ENSMUST00000218168 444 ntBASIC2.74□□□□□ -1.97
Col6a3E9PWQ3 AC129219.3-201ENSMUST00000223790 196 ntBASIC2.74□□□□□ -1.97
Col6a3E9PWQ3 Diaph3-206ENSMUST00000226745 713 ntBASIC2.74□□□□□ -1.97
Col6a3E9PWQ3 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 146 ms