Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm43722-201ENSMUST00000196054 124 ntBASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm43476-201ENSMUST00000197873 405 ntBASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a5A6H584 LOC667541-201ENSMUST00000223408 278 ntBASIC2.17□□□□□ -2.06
Col6a5A6H584 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col6a5A6H584 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm38032-201ENSMUST00000195052 1589 ntBASIC2.17□□□□□ -2.06
Col6a5A6H584 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a5A6H584 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm36951-201ENSMUST00000193840 2687 ntBASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a5A6H584 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a5A6H584 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm13588-201ENSMUST00000120026 135 ntBASIC2.17□□□□□ -2.06
Col6a5A6H584 Gm23264-201ENSMUST00000083372 107 ntBASIC2.17□□□□□ -2.06
Col6a5A6H584 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Col6a5A6H584 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a5A6H584 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a5A6H584 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a5A6H584 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a5A6H584 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col6a5A6H584 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC2.16□□□□□ -2.06
Col6a5A6H584 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 Gm12288-201ENSMUST00000121054 1282 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a5A6H584 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col6a5A6H584 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col6a5A6H584 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col6a5A6H584 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col6a5A6H584 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 Gm6574-201ENSMUST00000120037 362 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 Gm24291-201ENSMUST00000157633 162 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 Gm22534-201ENSMUST00000158173 104 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 Gm7592-201ENSMUST00000160674 627 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a5A6H584 Gm27991-201ENSMUST00000184804 137 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 Gm28627-201ENSMUST00000186141 453 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a5A6H584 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a5A6H584 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a5A6H584 AC166358.4-201ENSMUST00000223030 105 ntBASIC2.16□□□□□ -2.06
Col6a5A6H584 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col6a5A6H584 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col6a5A6H584 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col6a5A6H584 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm45223-201ENSMUST00000207037 5138 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Col6a5A6H584 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm24671-201ENSMUST00000104159 158 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm13880-201ENSMUST00000118421 474 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm15183-201ENSMUST00000118933 348 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm15019-201ENSMUST00000120148 434 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm14506-201ENSMUST00000121165 536 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm37996-201ENSMUST00000191859 367 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm37337-201ENSMUST00000192601 993 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm44157-201ENSMUST00000204720 410 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm45772-201ENSMUST00000212961 240 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC2.15□□□□□ -2.06
Col6a5A6H584 AC138401.2-201ENSMUST00000220461 365 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 AC129219.3-201ENSMUST00000223790 196 ntBASIC2.15□□□□□ -2.06
Col6a5A6H584 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
Col6a5A6H584 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.15□□□□□ -2.07
Col6a5A6H584 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Col6a5A6H584 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Col6a5A6H584 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Col6a5A6H584 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Col6a5A6H584 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Col6a5A6H584 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Col6a5A6H584 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Col6a5A6H584 Gm12871-201ENSMUST00000118758 438 ntBASIC2.15□□□□□ -2.07
Col6a5A6H584 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.15□□□□□ -2.07
Col6a5A6H584 Gm23325-201ENSMUST00000157422 129 ntBASIC2.15□□□□□ -2.07
Col6a5A6H584 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Col6a5A6H584 Gm19104-201ENSMUST00000198392 679 ntBASIC2.15□□□□□ -2.07
Col6a5A6H584 Mir3087-201ENSMUST00000199405 56 ntBASIC2.15□□□□□ -2.07
Col6a5A6H584 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
Col6a5A6H584 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC2.15□□□□□ -2.07
Col6a5A6H584 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Col6a5A6H584 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
Col6a5A6H584 Gm18493-201ENSMUST00000192084 1612 ntBASIC2.15□□□□□ -2.07
Col6a5A6H584 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.14□□□□□ -2.07
Col6a5A6H584 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col6a5A6H584 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.14□□□□□ -2.07
Col6a5A6H584 Gm11866-201ENSMUST00000120209 335 ntBASIC2.14□□□□□ -2.07
Col6a5A6H584 Gm22961-201ENSMUST00000157964 106 ntBASIC2.14□□□□□ -2.07
Col6a5A6H584 Gm16101-201ENSMUST00000160695 430 ntBASIC2.14□□□□□ -2.07
Col6a5A6H584 Gm8338-201ENSMUST00000163928 363 ntBASIC2.14□□□□□ -2.07
Col6a5A6H584 Mir5127-201ENSMUST00000175295 71 ntBASIC2.14□□□□□ -2.07
Col6a5A6H584 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.14□□□□□ -2.07
Col6a5A6H584 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.14□□□□□ -2.07
Col6a5A6H584 Gm21489-201ENSMUST00000189668 818 ntBASIC2.14□□□□□ -2.07
Col6a5A6H584 Gm18985-201ENSMUST00000196472 1079 ntBASIC2.14□□□□□ -2.07
Col6a5A6H584 Gm43478-201ENSMUST00000200381 292 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms