Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm44718-201ENSMUST00000206886 359 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm20586-201ENSMUST00000210122 547 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 AL645546.2-201ENSMUST00000224526 265 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 AC158388.1-201ENSMUST00000225441 256 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.15□□□□□ -1.9
Trem1Q9JKE2 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
Trem1Q9JKE2 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm11446-201ENSMUST00000121319 866 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm22219-201ENSMUST00000157562 319 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm25665-201ENSMUST00000157695 110 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Magea9-ps-202ENSMUST00000167328 899 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm20693-201ENSMUST00000177431 211 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm20674-201ENSMUST00000177452 369 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm6802-202ENSMUST00000186566 126 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm29597-201ENSMUST00000188035 308 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm37878-201ENSMUST00000192108 387 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm43142-201ENSMUST00000198670 361 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm45146-201ENSMUST00000207108 221 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm17780-201ENSMUST00000207142 612 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm30738-201ENSMUST00000221346 502 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Ap3m1-208ENSMUST00000224016 764 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 AC154626.1-201ENSMUST00000226070 311 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 CT025525.1-201ENSMUST00000226325 1054 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm25481-201ENSMUST00000083221 158 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.15□□□□□ -1.91
Trem1Q9JKE2 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Trem1Q9JKE2 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Mir599-201ENSMUST00000102378 88 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm5757-201ENSMUST00000117494 528 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm16089-201ENSMUST00000117679 336 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm11356-201ENSMUST00000118974 192 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm12190-201ENSMUST00000120001 187 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm14695-201ENSMUST00000121721 282 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm11403-201ENSMUST00000122195 369 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm14804-201ENSMUST00000122322 508 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm25967-201ENSMUST00000157168 147 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm25713-201ENSMUST00000158625 109 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm22529-201ENSMUST00000158817 123 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm22355-201ENSMUST00000175531 96 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm26556-201ENSMUST00000180645 320 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm27698-201ENSMUST00000184060 249 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm44016-201ENSMUST00000203463 164 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm8820-201ENSMUST00000204077 571 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm34224-201ENSMUST00000204606 364 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm23518-201ENSMUST00000082835 153 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm22739-201ENSMUST00000083437 160 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Gm25004-201ENSMUST00000083811 161 ntBASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 121.3 ms