Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm22308-201ENSMUST00000177609 107 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm24100-201ENSMUST00000178592 79 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm10784-201ENSMUST00000178715 238 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm24137-201ENSMUST00000180055 79 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm22391-201ENSMUST00000180356 79 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Mir6400-201ENSMUST00000184870 92 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm19193-201ENSMUST00000190263 590 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm42566-201ENSMUST00000197120 643 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm44922-201ENSMUST00000206690 90 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm44609-201ENSMUST00000207157 460 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm18904-201ENSMUST00000218756 329 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm33654-201ENSMUST00000221704 215 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 AW046200-203ENSMUST00000211787 2479 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm22831-201ENSMUST00000102473 109 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm24429-201ENSMUST00000104076 132 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Snord98-201ENSMUST00000116819 65 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm14627-201ENSMUST00000118931 567 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm11369-201ENSMUST00000120812 318 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm14298-201ENSMUST00000139032 237 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm16356-201ENSMUST00000143300 169 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm5699-201ENSMUST00000152491 723 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm22337-201ENSMUST00000157721 132 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm24997-201ENSMUST00000157910 105 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm28921-201ENSMUST00000190219 378 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm43712-201ENSMUST00000198020 291 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm2011-203ENSMUST00000203750 435 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm22577-201ENSMUST00000083731 109 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm8074-201ENSMUST00000095071 252 ntBASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim47Q8C0E3 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.9□□□□□ -1.47
Trim47Q8C0E3 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.9□□□□□ -1.47
Trim47Q8C0E3 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.9□□□□□ -1.47
Trim47Q8C0E3 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
Trim47Q8C0E3 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Trim47Q8C0E3 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.9□□□□□ -1.47
Trim47Q8C0E3 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trim47Q8C0E3 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Trim47Q8C0E3 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
Trim47Q8C0E3 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.9□□□□□ -1.47
Trim47Q8C0E3 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Trim47Q8C0E3 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.9□□□□□ -1.47
Trim47Q8C0E3 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim47Q8C0E3 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm8935-202ENSMUST00000105727 1959 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm14771-201ENSMUST00000118249 203 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm13511-201ENSMUST00000121167 363 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm11761-201ENSMUST00000121392 445 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm12685-201ENSMUST00000121702 214 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms