Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.62□□□□□ -1.51
Prpf40bQ80W14 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Prpf40bQ80W14 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.62□□□□□ -1.51
Prpf40bQ80W14 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Prpf40bQ80W14 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Prpf40bQ80W14 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Prpf40bQ80W14 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Mir761-201ENSMUST00000103245 76 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm11372-201ENSMUST00000117348 570 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm11196-201ENSMUST00000119052 395 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm5060-201ENSMUST00000120072 599 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm15142-201ENSMUST00000121013 856 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm23837-201ENSMUST00000122656 286 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm24441-201ENSMUST00000157235 281 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm27818-201ENSMUST00000184536 159 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Mir7047-201ENSMUST00000184595 64 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm44011-201ENSMUST00000203336 394 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm17990-201ENSMUST00000211728 553 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm31849-201ENSMUST00000220306 375 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm18116-201ENSMUST00000220920 537 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 AC133076.1-201ENSMUST00000228074 484 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm25260-201ENSMUST00000083053 134 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm25818-201ENSMUST00000083282 164 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Prpf40bQ80W14 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm15095-201ENSMUST00000118996 1430 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm12427-201ENSMUST00000117719 302 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm13567-201ENSMUST00000118026 247 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm22613-201ENSMUST00000122679 292 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm24745-201ENSMUST00000157840 85 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm25982-201ENSMUST00000157920 101 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm23318-201ENSMUST00000158000 108 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm25284-201ENSMUST00000180345 141 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm27528-201ENSMUST00000183544 205 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm28506-201ENSMUST00000189937 150 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm38044-201ENSMUST00000192964 487 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm5552-201ENSMUST00000197149 515 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm45105-201ENSMUST00000207824 397 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gm26330-201ENSMUST00000082817 104 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Prpf40bQ80W14 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.6□□□□□ -1.51
Prpf40bQ80W14 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf40bQ80W14 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf40bQ80W14 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Prpf40bQ80W14 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.59□□□□□ -1.51
Prpf40bQ80W14 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms