Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Gm24550-201ENSMUST00000158648 279 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Spanxn4-201ENSMUST00000172433 424 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Mir6715-201ENSMUST00000184990 57 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Gm18602-201ENSMUST00000209794 851 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Gm45878-201ENSMUST00000211839 241 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Gm19219-201ENSMUST00000215863 724 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Gm23448-201ENSMUST00000083151 104 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.9□□□□□ -1.79
Hmgb4Q6P8W9 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm25414-201ENSMUST00000101814 107 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm16017-201ENSMUST00000119834 208 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm15926-201ENSMUST00000120492 550 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm8244-201ENSMUST00000121254 264 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm15111-201ENSMUST00000122142 878 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm25102-201ENSMUST00000122479 112 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm23168-201ENSMUST00000157156 143 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm28956-201ENSMUST00000189047 427 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm28552-201ENSMUST00000190725 388 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Mir7682-201ENSMUST00000198467 58 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb4Q6P8W9 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm12467-201ENSMUST00000117625 745 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm14687-201ENSMUST00000120206 363 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm16412-201ENSMUST00000121602 273 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm23111-201ENSMUST00000122652 105 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm23540-201ENSMUST00000157543 164 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm10177-202ENSMUST00000161698 207 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm17154-201ENSMUST00000165748 431 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Mir5098-201ENSMUST00000175320 82 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm20773-201ENSMUST00000178940 681 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm18727-201ENSMUST00000185981 553 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm37104-201ENSMUST00000193278 196 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm44355-201ENSMUST00000200417 104 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm45912-201ENSMUST00000210646 543 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Olfr936-202ENSMUST00000216912 937 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 Gm9628-201ENSMUST00000222169 725 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.88□□□□□ -1.79
Hmgb4Q6P8W9 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms