Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm9068-201ENSMUST00000217393 455 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.17□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm24640-201ENSMUST00000116949 126 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm22626-201ENSMUST00000116990 126 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm12893-201ENSMUST00000121732 275 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Mir3066-201ENSMUST00000175296 83 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm20657-201ENSMUST00000177079 515 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm24761-201ENSMUST00000179589 127 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm24488-201ENSMUST00000179934 127 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm25701-201ENSMUST00000179988 127 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm26431-201ENSMUST00000180199 127 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm5058-201ENSMUST00000187331 463 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm22897-201ENSMUST00000197860 128 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm42663-201ENSMUST00000199883 351 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm43968-201ENSMUST00000203388 389 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm18854-201ENSMUST00000211196 329 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 AC151833.1-201ENSMUST00000227752 574 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm23412-201ENSMUST00000083017 107 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm25818-201ENSMUST00000083282 164 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.16□□□□□ -1.58
Sh3rf1Q69ZI1 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Sh3rf1Q69ZI1 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
Sh3rf1Q69ZI1 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.15□□□□□ -1.58
Sh3rf1Q69ZI1 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.15□□□□□ -1.58
Sh3rf1Q69ZI1 Gm12782-201ENSMUST00000117519 727 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm16089-201ENSMUST00000117679 336 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm11550-201ENSMUST00000118210 699 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm14669-201ENSMUST00000118841 250 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm12686-201ENSMUST00000120546 397 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm15212-201ENSMUST00000122403 466 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm24914-201ENSMUST00000157285 313 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm26731-201ENSMUST00000180683 543 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Mir6363-201ENSMUST00000184880 114 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm37682-201ENSMUST00000191776 522 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm37881-201ENSMUST00000193001 421 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm37882-201ENSMUST00000195254 196 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm42694-201ENSMUST00000196951 358 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm44419-201ENSMUST00000203338 229 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm18602-201ENSMUST00000209794 851 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm5750-201ENSMUST00000218711 801 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm25792-201ENSMUST00000083289 100 ntBASIC5.15□□□□□ -1.59
Sh3rf1Q69ZI1 Gm25008-201ENSMUST00000083809 81 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms